Protein Concepts Dictionary

Tableau information

Concept source:  d3wixa_  amino acid (a.a.) range (ASP172)(PHE318)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP172)  (GLY192) H1
	  (GLY203)  (HIS224) H2
	  (HIS224)  (ASP236) H3
	  (GLU240)  (ASP256) H4
	  (TRP261)  (ASN282) H5
	  (GLN283)  (ARG303) H6
	  (ARG303)  (ARG310) H7
	  (TRP312)  (PHE318) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
H2      -50.3°   H2                                               
H3      -98.8°  -92.9°   H3                                        
H4      114.5°   83.4°  131.4°   H4                                 
H5      -47.5°  -77.9°  -56.7°  160.3°   H5                          
H6      142.5°  102.0°  108.5°  -28.5°  165.0°   H6                   
H7       95.2°  120.5° -144.8°   68.5° -116.2°  -77.1°   H7            
H8      -48.0°   52.8° -141.7°   67.9°  -95.4°   96.3°   68.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1f16a_ :    (SER15)  (GLY166)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |Proapoptotic molecule Bax |Human (Homo sapiens) [TaxId: 9606]
 d4oq5c_ :   (GLY203)  (HIS320)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2o2ma_ :     (GLN7)  (LEU198)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |Apoptosis regulator Bcl-xL |Human (Homo sapiens) [TaxId: 9606]
 d1k3ka_ :    (VAL10)  (THR146)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |Bcl-2 homolog |Kaposi's sarcoma-associated herpesvirus [TaxId: 37296]
 d2voha_ :     (MET1)  (PRO150)   [view usage] : f.1.4.0 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d3wixa_ :   (ASP172)  (PHE318)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3wiya_ :   (ASP172)  (HIS320)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1ty4a_ :    (ILE80)  (ARG237)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |Apoptosis regulator ced-9 |Nematode (Caenorhabditis elegans) [TaxId: 6239]
 d3kj1a_ :   (SER202)  (HIS320)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2nlaa_ :   (ASP172)  (HIS320)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |EAT/MCL-1 (Myeloid cell leukemia sequence 1) |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2mhsa_ :     (ASP3)  (HIS151)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1wsxa_ :   (LEU155)  (GLU298)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |EAT/MCL-1 (Myeloid cell leukemia sequence 1) |Mouse (Mus musculus) [TaxId: 10090]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   f.1