Protein Concepts Dictionary

Tableau information

Concept source:  d1qs7c_  amino acid (a.a.) range (THR5)(ALA147)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (THR5)   (LYS21) H1
	   (THR28)   (GLY40) H2
	   (THR44)   (GLU54) H3
	   (ASP64)   (ARG74) H4
	   (LYS77)   (PHE92) H5
	  (SER101)  (GLY113) H6
	  (THR117)  (ALA128) H7
	  (TYR138)  (ALA147) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
H2       92.2°   H2                                               
H3     -154.6°  112.4°   H3                                        
H4      122.1°  -46.1°   81.6°   H4                                 
H5       44.0°   67.3° -139.8° -112.9°   H5                          
H6       73.9°  163.3°  -80.8°  150.0°   96.1°   H6                   
H7     -133.1°  -72.7°   64.3°  -26.6° -139.3°  123.5°   H7            
H8      111.3°  146.0°  -43.9° -125.3°  113.0°  -40.5°  104.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1lina_ :     (THR5)  (MET145)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calmodulin |Cow (Bos taurus) [TaxId: 9913]
 d1cdla_ :     (GLU7)  (MET144)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calmodulin |Human (Homo sapiens) [TaxId: 9606]
 d2k61a_ :    (LYS13)  (ALA147)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calmodulin |Human (Homo sapiens) [TaxId: 9606]
 d1qiwa_ :     (THR5)  (THR146)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calmodulin |Cow (Bos taurus) [TaxId: 9913]
 d2bbma_ :     (ASP2)  (MET144)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calmodulin |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
 d1qs7c_ :     (THR5)  (ALA147)   [view usage] : k.21.1.1 |Calmodulin |Calmodulin |Calmodulin |Calmodulin |Synthetic
 d3ewta_ :     (THR5)  (MET144)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1a29a_ :     (THR5)  (THR146)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calmodulin |Cow (Bos taurus) [TaxId: 9913]
 d1qs7a_ :     (ASP6)  (ALA147)   [view usage] : k.21.1.1 |Calmodulin |Calmodulin |Calmodulin |Calmodulin |Synthetic
 d1mxea_ :     (THR5)  (MET145)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calmodulin |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
 d1vrka_ :     (ASP6)  (VAL144)   [view usage] : k.21.1.1 |Calmodulin |Calmodulin |Calmodulin |Calmodulin |Synthetic
 d1sy9a1 :     (GLU6)  (THR146)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calmodulin |African clawed frog (Xenopus laevis) [TaxId: 8355]
 d3kf9a_ :    (THR22)  (LYS163)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |automated matches |Scherffelia dubia [TaxId: 3190]
 d4aqra_ :     (THR6)  (MET146)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d1qtxa_ :     (THR5)  (VAL144)   [view usage] : k.21.1.1 |Calmodulin |Calmodulin |Calmodulin |Calmodulin |Synthetic

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.39,    k.21