Protein Concepts Dictionary

Tableau information

Concept source:  d1f1sa1  amino acid (a.a.) range (ASN251)(VAL436)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASN251)  (TYR269) H1
	  (SER274)  (ALA293) H2
	  (SER313)  (ASN332) H3
	  (SER335)  (TYR338) H4
	  (LYS342)  (PHE358) H5
	  (TRP372)  (MET389) H6
	  (THR394)  (PHE408) H7
	  (GLY428)  (VAL436) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
H2     -107.7°   H2                                               
H3      -81.7° -121.9°   H3                                        
H4     -107.3°  -80.6°  -43.5°   H4                                 
H5      123.2°   60.2° -154.4° -122.3°   H5                          
H6      -87.4° -107.1°   14.8°  -29.3° -148.6°   H6                   
H7       90.7°   89.1° -149.0°  161.2°   39.4° -163.5°   H7            
H8     -110.7°  -68.9°   54.9°   11.7° -113.4°   40.4° -152.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1f1sa1 :   (ASN251)  (VAL436)   [view usage] : a.102.3.2 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Hyaluronate lyase-like catalytic, N-terminal domain |Hyaluronate lyase |Streptococcus agalactiae [TaxId: 1311]
 d1n7oa1 :   (GLY187)  (ARG364)   [view usage] : a.102.3.2 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Hyaluronate lyase-like catalytic, N-terminal domain |Hyaluronate lyase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
 d1cb8a1 :    (GLY26)  (LEU189)   [view usage] : a.102.3.2 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Hyaluronate lyase-like catalytic, N-terminal domain |Chondroitinase AC |Pedobacter heparinus (Flavobacterium heparinum) [TaxId: 984]
 d1c82a1 :   (GLY187)  (PHE328)   [view usage] : a.102.3.2 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Hyaluronate lyase-like catalytic, N-terminal domain |Hyaluronate lyase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
 d1loha1 :   (ASP172)  (MET353)   [view usage] : a.102.3.2 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Hyaluronate lyase-like catalytic, N-terminal domain |Hyaluronate lyase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
 d1n7na1 :   (ASP172)  (MET353)   [view usage] : a.102.3.2 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Hyaluronate lyase-like catalytic, N-terminal domain |Hyaluronate lyase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
 d1n7qa1 :   (THR173)  (VAL356)   [view usage] : a.102.3.2 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Hyaluronate lyase-like catalytic, N-terminal domain |Hyaluronate lyase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
 d1n7ra1 :   (THR173)  (ARG364)   [view usage] : a.102.3.2 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Hyaluronate lyase-like catalytic, N-terminal domain |Hyaluronate lyase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
 d1n7pa1 :   (GLY187)  (ARG364)   [view usage] : a.102.3.2 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Hyaluronate lyase-like catalytic, N-terminal domain |Hyaluronate lyase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
 d1f9ga1 :   (ASP172)  (MET353)   [view usage] : a.102.3.2 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Hyaluronate lyase-like catalytic, N-terminal domain |Hyaluronate lyase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
 d1lxka1 :   (GLY187)  (ARG364)   [view usage] : a.102.3.2 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Hyaluronate lyase-like catalytic, N-terminal domain |Hyaluronate lyase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.102