Protein Concepts Dictionary

Tableau information

Concept source:  d1p6ya_  amino acid (a.a.) range (THR59)(ARG154)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (THR59)   (ASN81) H1
	   (LYS85)   (LEU91) H2
	   (ALA93)  (MET106) H3
	  (GLY107)  (GLY113) H4
	  (ASN116)  (LYS124) H5
	  (TRP126)  (SER136) H6
	  (SER136)  (THR142) H7
	  (THR142)  (ARG154) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
H2     -103.7°   H2                                               
H3      106.6° -147.9°   H3                                        
H4      -42.9°   79.7°  116.6°   H4                                 
H5      -84.1°   28.9° -165.0°  -78.4°   H5                          
H6      116.1° -136.7°   11.4°  118.5° -159.4°   H6                   
H7     -156.4°  -65.5°   82.5° -113.6°  -91.7°  -71.2°   H7            
H8      -54.0°   58.4° -152.6°  -64.7°   31.8°  163.9° -123.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1l26a_ :    (THR59)  (THR155)   [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Phage T4 lysozyme |Bacteriophage T4 [TaxId: 10665]
 d174la_ :    (LYS60)  (THR155)   [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Phage T4 lysozyme |Bacteriophage T4 [TaxId: 10665]
 d1t8fa_ :    (THR59)  (ARG154)   [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Phage T4 lysozyme |Bacteriophage T4 [TaxId: 10665]
 d1p5ca_ :    (THR59)  (ARG154)   [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Phage T4 lysozyme |Bacteriophage T4 [TaxId: 10665]
 d1t97b_ :    (THR70)  (ARG165)   [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Phage T4 lysozyme |Bacteriophage T4 [TaxId: 10665]
 d176la_ :    (THR59)  (ARG154)   [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Phage T4 lysozyme |Bacteriophage T4 [TaxId: 10665]
 d151la_ :    (ASP61)  (GLY156)   [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Phage T4 lysozyme |Bacteriophage T4 [TaxId: 10665]
 d104la_ :    (LEU66)  (ARG154)   [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Phage T4 lysozyme |Bacteriophage T4 [TaxId: 10665]
 d169la_ :    (THR59)  (ARG154)   [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Phage T4 lysozyme |Bacteriophage T4 [TaxId: 10665]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   d.2