Protein Concepts Dictionary

Tableau information

Concept source:  d4kqwb2  amino acid (a.a.) range (GLU241)(PHE335)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLU241)  (GLU251) H1
	  (ILE254)  (SER260) H2
	  (SER262)  (TYR271) H3
	  (ALA272)  (ASN278) H4
	  (ASN278)  (GLY295) H5
	  (SER296)  (ASN307) H6
	  (LYS310)  (HIS322) H7
	  (HIS322)  (PHE335) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
H2      130.3°   H2                                               
H3      -86.3°  130.5°   H3                                        
H4     -106.0°  123.5°  -37.5°   H4                                 
H5      -71.5°  149.2°  -62.5°   45.4°   H5                          
H6     -138.4°   75.1°   99.7°   63.6°  -75.0°   H6                   
H7     -109.0°   23.1°  149.7°  144.6° -146.5°  -86.2°   H7            
H8      -80.4°   71.9° -156.8° -129.6°  -95.0°  -78.6°  -53.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4kqxa2 :   (GLU241)  (PHE335)   [view usage] : a.100.1.0 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |automated matches |automated matches |Slackia exigua [TaxId: 649764]
 d4kqwb2 :   (GLU241)  (PHE335)   [view usage] : a.100.1.0 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |automated matches |automated matches |Slackia exigua [TaxId: 649764]
 d4kqwa2 :   (GLU241)  (MET334)   [view usage] : a.100.1.0 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |automated matches |automated matches |Slackia exigua [TaxId: 649764]
 d1np3a1 :   (PRO220)  (PRO325)   [view usage] : a.100.1.2 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |Acetohydroxy acid isomeroreductase (ketol-acid reductoisomerase, KARI) |Class I ketol-acid reductoisomerase |Pseudomonas aeruginosa [TaxId: 287]
 d4kqxb2 :   (GLU241)  (PHE335)   [view usage] : a.100.1.0 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |automated matches |automated matches |Slackia exigua [TaxId: 649764]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.100