Protein Concepts Dictionary

Tableau information

Concept source:  d2o70a1  amino acid (a.a.) range (PRO26)(VAL166)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (PRO26)   (ARG36) H1
	   (LEU41)   (LEU55) H2
	   (ASP57)   (CYS66) H3
	   (GLY72)   (GLY78) H4
	   (THR81)   (GLY92) H5
	   (ASP97)  (GLY116) H6
	  (ASN127)  (LEU139) H7
	  (ARG142)  (VAL166) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
H2      119.8°   H2                                               
H3     -121.1°  116.8°   H3                                        
H4      -96.4°  131.0°  -29.4°   H4                                 
H5      114.0°  -97.4°  -71.9°  -96.1°   H5                          
H6       63.4°  -56.4° -166.1° -143.5°  119.5°   H6                   
H7       91.9°  -29.8° -146.4° -155.3° -101.7°   29.7°   H7            
H8      -66.7°  153.3°   55.6°   30.1°  103.0° -123.9° -152.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2o70c_ :    (PRO26)  (SER164)   [view usage] : a.288.1.1 |UraD-like |UraD-Like |UraD-like |OHCU decarboxylase, UraD |Zebrafish (Danio rerio) [TaxId: 7955]
 d2o70b_ :    (LEU27)  (ILE165)   [view usage] : a.288.1.1 |UraD-like |UraD-Like |UraD-like |OHCU decarboxylase, UraD |Zebrafish (Danio rerio) [TaxId: 7955]
 d2o70f_ :    (PRO26)  (LEU167)   [view usage] : a.288.1.1 |UraD-like |UraD-Like |UraD-like |OHCU decarboxylase, UraD |Zebrafish (Danio rerio) [TaxId: 7955]
 d2o70a1 :    (PRO26)  (VAL166)   [view usage] : a.288.1.1 |UraD-like |UraD-Like |UraD-like |OHCU decarboxylase, UraD |Zebrafish (Danio rerio) [TaxId: 7955]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.288