Protein Concepts Dictionary

Tableau information

Concept source:  d3cn5a_  amino acid (a.a.) range (LEU34)(ALA212)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LEU34)   (GLU65) H1
	   (LEU74)   (THR92) H2
	   (THR92)   (GLY97) H3
	  (ASN101)  (ARG112) H4
	  (LEU116)  (MET141) H5
	  (MET141)  (GLN147) H6
	  (ASN160)  (THR183) H7
	  (LEU200)  (ALA212) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
H2      166.4°   H2                                               
H3     -124.7°  -68.6°   H3                                        
H4      143.5°  -45.7°  -49.2°   H4                                 
H5      -34.2°  135.3°  135.6°  174.7°   H5                          
H6       77.3° -114.5°  -61.6°  -69.5°  110.1°   H6                   
H7      132.4°  -36.5° -101.1°  -59.9°  117.4°  120.8°   H7            
H8      -35.5°  157.0°   89.4°  123.5°  -57.8°   56.0°  165.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3gd8a_ :    (GLN32)  (ALA204)   [view usage] : f.19.1.0 |Aquaporin-like |Aquaporin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3cn6a_ :    (ILE54)  (ALA212)   [view usage] : f.19.1.0 |Aquaporin-like |Aquaporin-like |automated matches |automated matches |Spinach (Spinacia oleracea) [TaxId: 3562]
 d4ia4c_ :    (SER36)  (THR213)   [view usage] : f.19.1.0 |Aquaporin-like |Aquaporin-like |automated matches |automated matches |Spinach (Spinacia oleracea) [TaxId: 3562]
 d1z98a_ :    (ILE54)  (ILE214)   [view usage] : f.19.1.0 |Aquaporin-like |Aquaporin-like |automated matches |automated matches |Spinach (Spinacia oleracea) [TaxId: 3562]
 d4jc6c_ :    (LEU34)  (ALA212)   [view usage] : f.19.1.0 |Aquaporin-like |Aquaporin-like |automated matches |automated matches |Spinach (Spinacia oleracea) [TaxId: 3562]
 d4jc6n_ :    (LEU34)  (ALA212)   [view usage] : f.19.1.0 |Aquaporin-like |Aquaporin-like |automated matches |automated matches |Spinach (Spinacia oleracea) [TaxId: 3562]
 d3clla_ :    (GLU31)  (ALA212)   [view usage] : f.19.1.0 |Aquaporin-like |Aquaporin-like |automated matches |automated matches |Spinach (Spinacia oleracea) [TaxId: 3562]
 d3cn5a_ :    (LEU34)  (ALA212)   [view usage] : f.19.1.0 |Aquaporin-like |Aquaporin-like |automated matches |automated matches |Spinach (Spinacia oleracea) [TaxId: 3562]
 d4jc6a_ :    (LEU34)  (ILE214)   [view usage] : f.19.1.0 |Aquaporin-like |Aquaporin-like |automated matches |automated matches |Spinach (Spinacia oleracea) [TaxId: 3562]
 d4jc6l_ :    (LEU34)  (ALA212)   [view usage] : f.19.1.0 |Aquaporin-like |Aquaporin-like |automated matches |automated matches |Spinach (Spinacia oleracea) [TaxId: 3562]
 d4ia4a_ :    (SER36)  (ALA212)   [view usage] : f.19.1.0 |Aquaporin-like |Aquaporin-like |automated matches |automated matches |Spinach (Spinacia oleracea) [TaxId: 3562]
 d4ia4d_ :    (SER36)  (ALA182)   [view usage] : f.19.1.0 |Aquaporin-like |Aquaporin-like |automated matches |automated matches |Spinach (Spinacia oleracea) [TaxId: 3562]
 d4ia4b_ :    (SER36)  (THR213)   [view usage] : f.19.1.0 |Aquaporin-like |Aquaporin-like |automated matches |automated matches |Spinach (Spinacia oleracea) [TaxId: 3562]
 d4jc6d_ :    (LEU34)  (ALA212)   [view usage] : f.19.1.0 |Aquaporin-like |Aquaporin-like |automated matches |automated matches |Spinach (Spinacia oleracea) [TaxId: 3562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  f.19