Protein Concepts Dictionary

Tableau information

Concept source:  d4ai5a_  amino acid (a.a.) range (ASP10)(ASN121)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASP10)   (VAL20) H1
	   (LYS29)   (SER39) H2
	   (LEU47)   (LYS53) H3
	   (LYS53)   (ALA59) H4
	   (PRO65)   (MET71) H5
	   (ALA73)   (MET80) H6
	   (ARG89)  (ALA108) H7
	  (SER111)  (ASN121) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
H2     -136.5°   H2                                               
H3       85.9°  131.0°   H3                                        
H4       69.1°  114.5°  -49.5°   H4                                 
H5     -121.7°   40.3°  102.7°   74.2°   H5                          
H6     -141.3°  -56.9°  108.9°  147.0°  -90.5°   H6                   
H7       13.8°  150.2°  -73.3°  -65.3° -129.0°  139.8°   H7            
H8      -76.0°   72.5° -155.7°  133.3°  100.5°  -77.6°   86.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2ofia_ :    (PRO11)  (ASP121)   [view usage] : a.96.1.4 |DNA-glycosylase |DNA-glycosylase |3-Methyladenine DNA glycosylase I (Tag) |3-Methyladenine DNA glycosylase I (Tag) |Salmonella typhi [TaxId: 601]
 d2jg6a_ :    (ASP10)  (TRP117)   [view usage] : a.96.1.0 |DNA-glycosylase |DNA-glycosylase |automated matches |automated matches |Staphylococcus aureus [TaxId: 1280]
 d4aiaa_ :    (ASP10)  (LEU116)   [view usage] : a.96.1.0 |DNA-glycosylase |DNA-glycosylase |automated matches |automated matches |Staphylococcus aureus [TaxId: 1280]
 d2ofka_ :    (ASP10)  (ASP121)   [view usage] : a.96.1.4 |DNA-glycosylase |DNA-glycosylase |3-Methyladenine DNA glycosylase I (Tag) |3-Methyladenine DNA glycosylase I (Tag) |Salmonella typhi [TaxId: 601]
 d4aiab_ :    (HIS17)  (TRP117)   [view usage] : a.96.1.0 |DNA-glycosylase |DNA-glycosylase |automated matches |automated matches |Staphylococcus aureus [TaxId: 1280]
 d4ai5a_ :    (ASP10)  (ASN121)   [view usage] : a.96.1.0 |DNA-glycosylase |DNA-glycosylase |automated matches |automated matches |Staphylococcus aureus [TaxId: 282459]
 d4ai5b_ :    (HIS17)  (TRP117)   [view usage] : a.96.1.0 |DNA-glycosylase |DNA-glycosylase |automated matches |automated matches |Staphylococcus aureus [TaxId: 282459]
 d4ai4a_ :    (ASP10)  (TRP117)   [view usage] : a.96.1.0 |DNA-glycosylase |DNA-glycosylase |automated matches |automated matches |Staphylococcus aureus [TaxId: 282459]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.96