Protein Concepts Dictionary

Tableau information

Concept source:  d2glnb_  amino acid (a.a.) range (LEU3)(THR127)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (LEU3)   (ARG10) H1
	   (SER14)   (GLY20) H2
	   (HIS22)   (ASP39) H3
	   (SER43)   (SER47) H4
	   (ASN50)   (GLY67) H5
	   (PRO76)   (GLN82) H6
	   (THR87)  (GLY106) H7
	  (PRO108)  (THR127) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
H2     -132.2°   H2                                               
H3      122.6°   85.5°   H3                                        
H4      109.8° -106.6°  -91.6°   H4                                 
H5      -19.6°  112.8°  126.6°  125.6°   H5                          
H6     -141.2°   77.7°  -21.6°   74.9° -148.1°   H6                   
H7      -93.5°   47.2°  132.5° -105.0°  -78.3°  123.3°   H7            
H8       94.4° -133.0°  -59.3°   50.4°  113.2°  -57.9°  155.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2gl3b_ :     (GLY2)  (THR127)   [view usage] : a.1.1.1 |Globin-like |Globin-like |Truncated hemoglobin |Protozoan/bacterial hemoglobin |Mycobacterium tuberculosis, HbN [TaxId: 1773]
 d1idrb_ :     (LEU4)  (THR127)   [view usage] : a.1.1.1 |Globin-like |Globin-like |Truncated hemoglobin |Protozoan/bacterial hemoglobin |Mycobacterium tuberculosis, HbN [TaxId: 1773]
 d2gkna_ :     (GLY2)  (LEU116)   [view usage] : a.1.1.1 |Globin-like |Globin-like |Truncated hemoglobin |Protozoan/bacterial hemoglobin |Mycobacterium tuberculosis, HbN [TaxId: 1773]
 d2glna_ :     (LEU4)  (THR127)   [view usage] : a.1.1.1 |Globin-like |Globin-like |Truncated hemoglobin |Protozoan/bacterial hemoglobin |Mycobacterium tuberculosis, HbN [TaxId: 1773]
 d2gknb_ :     (GLY2)  (THR127)   [view usage] : a.1.1.1 |Globin-like |Globin-like |Truncated hemoglobin |Protozoan/bacterial hemoglobin |Mycobacterium tuberculosis, HbN [TaxId: 1773]
 d1s56b_ :     (GLY2)  (THR127)   [view usage] : a.1.1.1 |Globin-like |Globin-like |Truncated hemoglobin |Protozoan/bacterial hemoglobin |Mycobacterium tuberculosis, HbN [TaxId: 1773]
 d2glnb_ :     (LEU3)  (THR127)   [view usage] : a.1.1.1 |Globin-like |Globin-like |Truncated hemoglobin |Protozoan/bacterial hemoglobin |Mycobacterium tuberculosis, HbN [TaxId: 1773]
 d2gkmb_ :     (GLY2)  (THR127)   [view usage] : a.1.1.1 |Globin-like |Globin-like |Truncated hemoglobin |Protozoan/bacterial hemoglobin |Mycobacterium tuberculosis, HbN [TaxId: 1773]
 d2gkma_ :     (LEU4)  (THR127)   [view usage] : a.1.1.1 |Globin-like |Globin-like |Truncated hemoglobin |Protozoan/bacterial hemoglobin |Mycobacterium tuberculosis, HbN [TaxId: 1773]
 d2gl3a_ :     (GLY2)  (THR127)   [view usage] : a.1.1.1 |Globin-like |Globin-like |Truncated hemoglobin |Protozoan/bacterial hemoglobin |Mycobacterium tuberculosis, HbN [TaxId: 1773]
 d1idra_ :     (LEU3)  (LEU122)   [view usage] : a.1.1.1 |Globin-like |Globin-like |Truncated hemoglobin |Protozoan/bacterial hemoglobin |Mycobacterium tuberculosis, HbN [TaxId: 1773]
 d1rtea_ :     (GLY2)  (VAL126)   [view usage] : a.1.1.1 |Globin-like |Globin-like |Truncated hemoglobin |Protozoan/bacterial hemoglobin |Mycobacterium tuberculosis, HbN [TaxId: 1773]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   a.1