Protein Concepts Dictionary

Tableau information

Concept source:  d2bkzc_  amino acid (a.a.) range (PRO171)(VAL289)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (PRO171)  (GLY176) H1
	  (ALA183)  (VAL197) H2
	  (SER207)  (GLY220) H3
	  (MET233)  (TYR236) H4
	  (ASP247)  (VAL252) H5
	  (ASP256)  (HIS268) H6
	  (SER276)  (HIS283) H7
	  (HIS283)  (VAL289) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
H2     -125.1°   H2                                               
H3     -138.0°   71.0°   H3                                        
H4       59.0°  -75.7°  -96.2°   H4                                 
H5       96.1°  -68.8°  125.0°  108.4°   H5                          
H6      -20.7° -144.1° -137.0°  -78.6°   96.4°   H6                   
H7      155.0°  -36.1°   38.4°  -96.1°  -89.5°  173.0°   H7            
H8     -135.4°   56.2°   86.6°  128.1°  -39.7° -130.2°  -56.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3pxfa_ :   (PRO171)  (VAL289)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Cyclin-dependent PK, CDK2 |Human (Homo sapiens) [TaxId: 9606]
 d2c4ga_ :   (PRO171)  (VAL289)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2pmia_ :   (ALA176)  (HIS302)   [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1okva_ :   (ALA170)  (VAL289)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Cyclin-dependent PK, CDK2 |Human (Homo sapiens) [TaxId: 9606]
 d2c4gc_ :   (PRO171)  (VAL289)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1vywa_ :   (PRO171)  (VAL289)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Cyclin-dependent PK, CDK2 |Human (Homo sapiens) [TaxId: 9606]
 d4gcja_ :   (PRO171)  (VAL289)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Cyclin-dependent PK, CDK2 |Human (Homo sapiens) [TaxId: 9606]
 d2bkzc_ :   (PRO171)  (VAL289)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1fina_ :   (PRO171)  (VAL289)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Cyclin-dependent PK, CDK2 |Human (Homo sapiens) [TaxId: 9606]
 d3g33a_ :   (ALA187)  (LEU300)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.144