Protein Concepts Dictionary

Tableau information

Concept source:  d2fbwb2  amino acid (a.a.) range (SER145)(THR244)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER145)  (ASP153) H1
	  (ASP153)  (CYS158) H2
	  (ALA162)  (CYS168) H3
	  (CYS168)  (TRP173) H4
	  (PRO181)  (ASP193) H5
	  (TYR198)  (GLN207) H6
	  (MET219)  (CYS225) H7
	  (PRO231)  (THR244) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
H2       50.3°   H2                                               
H3       50.8°  -90.4°   H3                                        
H4      -63.5°  -42.1°  -70.0°   H4                                 
H5      175.4° -130.4°  125.3°  113.6°   H5                          
H6       22.8°   63.6°  -29.2°   58.3° -152.9°   H6                   
H7       97.5°   77.3°  143.7° -115.6°  -86.9°  120.2°   H7            
H8     -119.2° -115.3°  -75.1°   74.4°   56.3°  -97.5°  141.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3vr8b2 :   (SER169)  (LEU266)   [view usage] : a.1.2.0 |Globin-like |alpha-helical ferredoxin |automated matches |automated matches |Pig roundworm (Ascaris suum) [TaxId: 6253]
 d2wp9b2 :   (MET136)  (ARG236)   [view usage] : a.1.2.1 |Globin-like |alpha-helical ferredoxin |Fumarate reductase/Succinate dehydogenase iron-sulfur protein, C-terminal domain |automated matches |Escherichia coli [TaxId: 562]
 d1yq3b2 :   (SER145)  (THR244)   [view usage] : a.1.2.1 |Globin-like |alpha-helical ferredoxin |Fumarate reductase/Succinate dehydogenase iron-sulfur protein, C-terminal domain |Succinate dehydogenase |Chicken (Gallus gallus) [TaxId: 9031]
 d1nekb1 :   (MET136)  (ARG236)   [view usage] : a.1.2.1 |Globin-like |alpha-helical ferredoxin |Fumarate reductase/Succinate dehydogenase iron-sulfur protein, C-terminal domain |Succinate dehydogenase |Escherichia coli [TaxId: 562]
 d1zoyb2 :   (SER145)  (THR244)   [view usage] : a.1.2.1 |Globin-like |alpha-helical ferredoxin |Fumarate reductase/Succinate dehydogenase iron-sulfur protein, C-terminal domain |Succinate dehydogenase |Pig (Sus scrofa) [TaxId: 9823]
 d2fbwb2 :   (SER145)  (THR244)   [view usage] : a.1.2.1 |Globin-like |alpha-helical ferredoxin |Fumarate reductase/Succinate dehydogenase iron-sulfur protein, C-terminal domain |Succinate dehydogenase |Chicken (Gallus gallus) [TaxId: 9031]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   a.1