Protein Concepts Dictionary

Tableau information

Concept source:  d1hk2a3  amino acid (a.a.) range (LYS389)(LYS560)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LYS389)  (GLY399) H1
	  (TYR401)  (VAL415) H2
	  (THR420)  (LYS436) H3
	  (PRO441)  (PRO468) H4
	  (ASP471)  (CYS477) H5
	  (ARG484)  (LEU491) H6
	  (GLU518)  (HIS535) H7
	  (THR540)  (LYS560) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
H2      128.0°   H2                                               
H3      -96.4°  133.8°   H3                                        
H4       86.5°  -46.7°  170.5°   H4                                 
H5     -124.2°  104.5°   44.8° -126.6°   H5                          
H6       63.5°   83.1° -110.6°   78.8°  151.4°   H6                   
H7      120.7°  -30.4°  119.4°  -65.9°  114.1°   60.3°   H7            
H8      -34.1°  118.2° -105.8°   71.8° -108.3°   91.2°  132.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1hk2a3 :   (LYS389)  (LYS560)   [view usage] : a.126.1.1 |Serum albumin-like |Serum albumin-like |Serum albumin-like |Serum albumin |Human (Homo sapiens) [TaxId: 9606]
 d1bj5a3 :   (LYS389)  (ALA561)   [view usage] : a.126.1.1 |Serum albumin-like |Serum albumin-like |Serum albumin-like |Serum albumin |Human (Homo sapiens) [TaxId: 9606]
 d4lufa3 :   (LYS388)  (ALA560)   [view usage] : a.126.1.0 |Serum albumin-like |Serum albumin-like |automated matches |automated matches |Sheep (Ovis aries) [TaxId: 9940]
 d1e7bb3 :   (LYS389)  (LYS560)   [view usage] : a.126.1.1 |Serum albumin-like |Serum albumin-like |Serum albumin-like |Serum albumin |Human (Homo sapiens) [TaxId: 9606]
 d2vufa3 :   (LYS389)  (ALA561)   [view usage] : a.126.1.0 |Serum albumin-like |Serum albumin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4f5va3 :   (ASN391)  (ALA561)   [view usage] : a.126.1.0 |Serum albumin-like |Serum albumin-like |automated matches |automated matches |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d1hk1a3 :   (LYS389)  (LYS560)   [view usage] : a.126.1.1 |Serum albumin-like |Serum albumin-like |Serum albumin-like |Serum albumin |Human (Homo sapiens) [TaxId: 9606]
 d2bxia2 :   (LYS389)  (ALA561)   [view usage] : a.126.1.0 |Serum albumin-like |Serum albumin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2vuea2 :   (LYS389)  (ALA561)   [view usage] : a.126.1.1 |Serum albumin-like |Serum albumin-like |Serum albumin-like |Serum albumin |Human (Homo sapiens) [TaxId: 9606]
 d1e7ha3 :   (LYS389)  (ALA561)   [view usage] : a.126.1.1 |Serum albumin-like |Serum albumin-like |Serum albumin-like |Serum albumin |Human (Homo sapiens) [TaxId: 9606]
 d1tf0a3 :   (LYS389)  (ALA561)   [view usage] : a.126.1.1 |Serum albumin-like |Serum albumin-like |Serum albumin-like |Serum albumin |Human (Homo sapiens) [TaxId: 9606]
 d1hk3a3 :   (LYS389)  (LYS560)   [view usage] : a.126.1.1 |Serum albumin-like |Serum albumin-like |Serum albumin-like |Serum albumin |Human (Homo sapiens) [TaxId: 9606]
 d2bxha3 :   (LYS389)  (ALA561)   [view usage] : a.126.1.1 |Serum albumin-like |Serum albumin-like |Serum albumin-like |Serum albumin |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.126