Protein Concepts Dictionary

Tableau information

Concept source:  d1kgna_  amino acid (a.a.) range (GLU27)(PHE172)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLU27)   (PHE40) H1
	   (LEU42)   (PRO47) H2
	   (PRO47)   (MET58) H3
	   (THR59)   (ALA92) H4
	   (MET95)  (ALA123) H5
	  (THR125)  (GLU137) H6
	  (ASN138)  (GLY154) H7
	  (ASP156)  (PHE172) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
H2       45.7°   H2                                               
H3      -76.5°   66.1°   H3                                        
H4     -140.9°  150.7°  136.8°   H4                                 
H5       25.0°  -41.3°  -51.6° -161.3°   H5                          
H6      153.1°  135.6°   81.7°  -55.6°  131.4°   H6                   
H7     -139.1°  143.6°  142.0°   -7.1° -162.6°  -60.3°   H7            
H8       38.2°   -8.5°   63.2° -157.2°   32.9°  138.7° -150.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1kgna_ :    (GLU27)  (PHE172)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Ribonucleotide reductase R2 |Corynebacterium ammoniagenes [TaxId: 1697]
 d1uzrb_ :    (GLU22)  (ALA181)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Ribonucleotide reductase R2 |Mycobacterium tuberculosis [TaxId: 1773]
 d3vpoa_ :    (TRP91)  (GLY250)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1uzra_ :    (GLU22)  (PHE171)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Ribonucleotide reductase R2 |Mycobacterium tuberculosis [TaxId: 1773]
 d4bmoa_ :    (SER14)  (GLY179)   [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Bacillus cereus [TaxId: 1396]
 d4bmqb_ :    (SER14)  (PHE165)   [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Bacillus cereus [TaxId: 1396]
 d1syya_ :    (LYS37)  (ASN211)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Ribonucleotide reductase R2 |Chlamydia trachomatis [TaxId: 813]
 d3vpna_ :    (TYR87)  (GLY250)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4djna_ :    (TYR49)  (SER199)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1uzrc_ :    (GLU22)  (ALA181)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Ribonucleotide reductase R2 |Mycobacterium tuberculosis [TaxId: 1773]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.25