Tableau information
Concept source: d2vooa1 amino acid (a.a.) range (MET10)(ARG91)
nSSEs in this Concept: 8
String of secondary struct.elems. (SSEs) defining this concept: HHHHHHEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(MET10) (PHE25) H1
(ASP27) (ASP33) H2
(ASP33) (ASP43) H3
(PRO48) (LYS54) H4
(ASN56) (THR62) H5
(ASP64) (SER75) H6
(LEU79) (SER83) E7
(THR87) (ARG91) E8
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -52.9° H2
H3 -87.6° -84.4° H3
H4 92.8° 95.3° 179.1° H4
H5 -163.9° -119.1° -77.3° -102.2° H5
H6 -79.4° -132.0° -89.3° 91.5° 105.6° H6
E7 98.7° 59.3° 45.7° -133.4° -66.8° -134.9° E7
E8 -56.3° -106.4° -110.6° 70.2° 134.5° 33.9° 149.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2voda1 : (GLU8) (ARG91) [view usage] : a.4.5.46 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |La domain |Lupus La autoantigen N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1ytya1 : (ASP6) (ARG91) [view usage] : a.4.5.46 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |La domain |Lupus La autoantigen N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1ytyb1 : (ASN7) (ARG91) [view usage] : a.4.5.46 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |La domain |Lupus La autoantigen N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d2vopa1 : (GLU8) (ARG91) [view usage] : a.4.5.46 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |La domain |Lupus La autoantigen N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d2vooa1 : (MET10) (ARG91) [view usage] : a.4.5.46 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |La domain |Lupus La autoantigen N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d2vonb1 : (ASN7) (ARG91) [view usage] : a.4.5.46 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |La domain |Lupus La autoantigen N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d2voob1 : (ALA11) (ARG91) [view usage] : a.4.5.46 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |La domain |Lupus La autoantigen N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1s29a_ : (SER7) (ARG87) [view usage] : a.4.5.46 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |La domain |Lupus La autoantigen N-terminal domain |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.4