Protein Concepts Dictionary

Tableau information

Concept source:  d3erda_  amino acid (a.a.) range (THR311)(ARG412)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (THR311)  (GLU323) H1
	  (SER338)  (VAL364) H2
	  (VAL364)  (LEU370) H3
	  (THR371)  (ALA382) H4
	  (ALA382)  (SER395) H5
	  (SER395)  (PRO399) H6
	  (GLY400)  (PHE404) E7
	  (ASN407)  (ARG412) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
H2      140.8°   H2                                               
H3       79.8°  -80.9°   H3                                        
H4      -69.7°  144.6°  131.2°   H4                                 
H5      -89.1°  103.2° -166.2°   49.9°   H5                          
H6      -88.8° -126.3°  141.3°   19.2°  -45.4°   H6                   
E7       75.5°   67.4°  -41.4° -145.0°  127.8°  163.6°   E7            
E8      100.4° -114.6°   93.4°   57.7°  -96.7°  -52.3°  134.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2ioga_ :   (PRO336)  (ARG412)   [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Estrogen receptor alpha |Human (Homo sapiens) [TaxId: 9606]
 d1qkta_ :   (PRO336)  (ARG412)   [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Estrogen receptor alpha |Human (Homo sapiens) [TaxId: 9606]
 d2ouza_ :   (THR311)  (ARG412)   [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Estrogen receptor alpha |Human (Homo sapiens) [TaxId: 9606]
 d3erda_ :   (THR311)  (ARG412)   [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Estrogen receptor alpha |Human (Homo sapiens) [TaxId: 9606]
 d1xp1a_ :   (PRO336)  (ARG412)   [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Estrogen receptor alpha |Human (Homo sapiens) [TaxId: 9606]
 d2yjab_ :   (THR311)  (ARG412)   [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Estrogen receptor alpha |Human (Homo sapiens) [TaxId: 9606]
 d1a52b_ :   (THR311)  (ARG412)   [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Estrogen receptor alpha |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.123