Tableau information
Concept source: d2ca1b_ amino acid (a.a.) range (ARG237)(CYS323)
nSSEs in this Concept: 8
String of secondary struct.elems. (SSEs) defining this concept: HHHHHEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ARG237) (PHE242) H1
(LYS249) (ASP255) H2
(ASP255) (GLU260) H3
(GLY266) (VAL275) H4
(SER277) (PHE283) H5
(ARG286) (LEU291) E6
(GLY295) (PRO307) E7
(GLN312) (CYS323) H8
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 162.6° H2
H3 77.7° 92.0° H3
H4 -36.9° 134.3° -98.7° H4
H5 -50.4° 140.5° -127.3° 46.0° H5
E6 -52.9° -135.0° -65.7° -89.1° -74.8° E6
E7 137.7° 37.3° 118.1° 101.0° 107.9° 168.2° E7
H8 -77.4° 117.0° -90.0° -107.4° -72.4° 32.7° -136.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2ca1b_ : (ARG237) (CYS323) [view usage] : d.254.1.2 |Nucleocapsid protein dimerization domain |Nucleocapsid protein dimerization domain |Coronavirus nucleocapsid protein |Coronavirus nucleocapsid protein |Avian infectious bronchitis virus [TaxId: 11120]
d2ge8a1 : (LYS19) (CYS105) [view usage] : d.254.1.2 |Nucleocapsid protein dimerization domain |Nucleocapsid protein dimerization domain |Coronavirus nucleocapsid protein |Coronavirus nucleocapsid protein |Avian infectious bronchitis virus [TaxId: 11120]
d2ge7b_ : (LYS19) (GLN104) [view usage] : d.254.1.2 |Nucleocapsid protein dimerization domain |Nucleocapsid protein dimerization domain |Coronavirus nucleocapsid protein |Coronavirus nucleocapsid protein |Avian infectious bronchitis virus [TaxId: 11120]
d2ge8b_ : (VAL20) (VAL106) [view usage] : d.254.1.2 |Nucleocapsid protein dimerization domain |Nucleocapsid protein dimerization domain |Coronavirus nucleocapsid protein |Coronavirus nucleocapsid protein |Avian infectious bronchitis virus [TaxId: 11120]
d2ge8g_ : (LYS19) (GLN104) [view usage] : d.254.1.2 |Nucleocapsid protein dimerization domain |Nucleocapsid protein dimerization domain |Coronavirus nucleocapsid protein |Coronavirus nucleocapsid protein |Avian infectious bronchitis virus [TaxId: 11120]
d2ge7a1 : (LYS19) (GLN104) [view usage] : d.254.1.2 |Nucleocapsid protein dimerization domain |Nucleocapsid protein dimerization domain |Coronavirus nucleocapsid protein |Coronavirus nucleocapsid protein |Avian infectious bronchitis virus [TaxId: 11120]
d2ge8d_ : (LYS19) (GLN104) [view usage] : d.254.1.2 |Nucleocapsid protein dimerization domain |Nucleocapsid protein dimerization domain |Coronavirus nucleocapsid protein |Coronavirus nucleocapsid protein |Avian infectious bronchitis virus [TaxId: 11120]
d2ge8f_ : (VAL20) (GLN104) [view usage] : d.254.1.2 |Nucleocapsid protein dimerization domain |Nucleocapsid protein dimerization domain |Coronavirus nucleocapsid protein |Coronavirus nucleocapsid protein |Avian infectious bronchitis virus [TaxId: 11120]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.254