Protein Concepts Dictionary

Tableau information

Concept source:  d2wuab1  amino acid (a.a.) range (ASN178)(LYS273)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HHHHHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASN178)  (MET184) H1
	  (MET184)  (LEU192) H2
	  (MET194)  (SER206) H3
	  (THR208)  (GLY230) H4
	  (GLY230)  (GLU235) H5
	  (GLU235)  (ASP245) E6
	  (GLY249)  (SER257) E7
	  (SER267)  (LYS273) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
H2     -106.9°   H2                                               
H3        4.5° -110.5°   H3                                        
H4      117.1°  -50.4°  116.9°   H4                                 
H5      130.6° -115.3°  126.1°  -75.9°   H5                          
E6     -130.2°  -67.0° -133.8°  -96.9°   90.6°   E6                   
E7       39.2°  104.2°   36.4°   84.9° -103.8°  165.5°   E7            
H8     -111.9°  120.2° -111.3°  130.5°  -67.3°   53.3° -134.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1wdkc1 :   (ASN137)  (ALA225)   [view usage] : c.95.1.1 |Thiolase-like |Thiolase-like |Thiolase-related |Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) |Pseudomonas fragi [TaxId: 296]
 d2wuab1 :   (ASN178)  (LYS273)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Common sunflower (Helianthus annuus) [TaxId: 4232]
 d2wu9a1 :   (ASN180)  (LYS275)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d4ubva1 :   (ARG136)  (LEU231)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d2wuaa1 :   (ASN178)  (LYS273)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Common sunflower (Helianthus annuus) [TaxId: 4232]
 d4ubvb1 :   (ARG136)  (GLU230)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.95