Protein Concepts Dictionary

Tableau information

Concept source:  d3bdja3  amino acid (a.a.) range (THR324)(SER412)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HHHHEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (THR324)  (ARG335) H1
	  (GLY339)  (VAL345) H2
	  (SER347)  (ALA355) H3
	  (SER359)  (GLY369) H4
	  (LYS371)  (ARG377) E5
	  (GLY378)  (PRO384) E6
	  (ASP386)  (PRO391) H7
	  (GLU401)  (SER412) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
H2      128.0°   H2                                               
H3       85.1°   91.6°   H3                                        
H4      169.2°  -55.2°  -84.4°   H4                                 
E5      -77.9°   50.1°  -90.5° -104.9°   E5                          
E6       93.9° -136.0°   77.7°   81.2°  166.2°   E6                   
H7      -41.1°   88.8°  -71.5°  136.3°   41.9° -125.9°   H7            
E8     -115.7° -115.6°  103.3°   64.4°  161.1°  -32.5° -155.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3nvvb1 :   (THR324)  (SER412)   [view usage] : d.145.1.3 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |CO dehydrogenase flavoprotein N-terminal domain-like |automated matches |Cow (Bos taurus) [TaxId: 9913]
 d1fo4a6 :   (THR324)  (SER412)   [view usage] : d.145.1.3 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |CO dehydrogenase flavoprotein N-terminal domain-like |Xanthine oxidase, domain 3 (?) |Cow (Bos taurus) [TaxId: 9913]
 d1t3qc2 :    (ILE92)  (PRO172)   [view usage] : d.145.1.3 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |CO dehydrogenase flavoprotein N-terminal domain-like |Quinoline 2-oxidoreductase medium subunit QorM |Pseudomonas putida [TaxId: 303]
 d1fiqb2 :   (THR324)  (SER412)   [view usage] : d.145.1.3 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |CO dehydrogenase flavoprotein N-terminal domain-like |Xanthine oxidase, domain 3 (?) |Cow (Bos taurus) [TaxId: 9913]
 d3eubk1 :   (GLU325)  (SER412)   [view usage] : d.145.1.3 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |CO dehydrogenase flavoprotein N-terminal domain-like |automated matches |Cow (Bos taurus) [TaxId: 9913]
 d3bdja3 :   (THR324)  (SER412)   [view usage] : d.145.1.3 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |CO dehydrogenase flavoprotein N-terminal domain-like |Xanthine oxidase, domain 3 (?) |Cow (Bos taurus) [TaxId: 9913]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.145