Protein Concepts Dictionary

Tableau information

Concept source:  d4lt6a2  amino acid (a.a.) range (ASN215)(GLY353)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HHHEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASN215)  (GLY234) H1
	  (GLY245)  (TYR259) H2
	  (ALA263)  (TRP278) H3
	  (PRO281)  (LEU286) E4
	  (ASN304)  (HIS310) H5
	  (MET312)  (ALA318) E6
	  (ASN323)  (VAL328) H7
	  (THR330)  (GLY353) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
H2      133.5°   H2                                               
H3      -58.4°  105.3°   H3                                        
E4     -143.8°   72.2°  150.7°   E4                                 
H5       76.3°  -74.8° -116.6°   91.3°   H5                          
E6     -142.0°   84.5°  121.5°  -30.3°  121.6°   E6                   
H7       12.5° -123.2°  -64.9°  141.7°   64.3°  150.5°   H7            
H8      119.4°  -44.9° -141.5°   56.0°  -43.2°   84.5°  107.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.5°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4lt6a2 :   (ASN215)  (GLY353)   [view usage] : a.160.1.0 |PAP/OAS1 substrate-binding domain |PAP/OAS1 substrate-binding domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1q78a1 :   (ASN216)  (SER354)   [view usage] : a.160.1.1 |PAP/OAS1 substrate-binding domain |PAP/OAS1 substrate-binding domain |Poly(A) polymerase, PAP, middle domain |Poly(A) polymerase, PAP, middle domain |Cow (Bos taurus) [TaxId: 9913]
 d1f5aa3 :   (ASN216)  (SER354)   [view usage] : a.160.1.1 |PAP/OAS1 substrate-binding domain |PAP/OAS1 substrate-binding domain |Poly(A) polymerase, PAP, middle domain |Poly(A) polymerase, PAP, middle domain |Cow (Bos taurus) [TaxId: 9913]
 d1fa0a3 :   (LYS203)  (GLN333)   [view usage] : a.160.1.1 |PAP/OAS1 substrate-binding domain |PAP/OAS1 substrate-binding domain |Poly(A) polymerase, PAP, middle domain |Poly(A) polymerase, PAP, middle domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.160