Protein Concepts Dictionary

Tableau information

Concept source:  d3bwia_  amino acid (a.a.) range (PHE260)(LYS359)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HHHEHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (PHE260)  (GLY267) H1
	  (HIS269)  (ASP275) H2
	  (SER276)  (ALA300) H3
	  (LYS301)  (GLY305) E4
	  (SER309)  (LYS320) H5
	  (LEU323)  (THR327) E6
	  (LYS330)  (LYS335) E7
	  (LYS335)  (LYS359) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
H2     -139.3°   H2                                               
H3      -91.1°   87.8°   H3                                        
E4      -84.7°  135.6°  -85.0°   E4                                 
H5       77.4°  -95.8° -166.1°  101.4°   H5                          
E6       82.3°  -68.4°  -45.4° -128.1° -124.0°   E6                   
E7       78.6° -100.9°  169.6°   92.4°    9.3°  133.0°   E7            
H8      -69.0°  141.6°  122.7°  -41.8°   60.5°  149.5°   52.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2isea_ :   (SER259)  (TYR349)   [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |automated matches |Clostridium botulinum [TaxId: 1491]
 d3bwia_ :   (PHE260)  (LYS359)   [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |automated matches |Clostridium botulinum [TaxId: 1491]
 d4ej5a_ :   (PHE260)  (LYS359)   [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |Botulinum neurotoxin |Clostridium botulinum, serotype A [TaxId: 1491]
 d4ks6a_ :   (PHE260)  (LYS359)   [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |Botulinum neurotoxin |Clostridium botulinum, serotype A [TaxId: 1491]
 d1xtga_ :   (PHE260)  (THR350)   [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |Botulinum neurotoxin |Clostridium botulinum, serotype A [TaxId: 1491]
 d3c88a_ :   (PHE260)  (LYS359)   [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |automated matches |Clostridium botulinum [TaxId: 1491]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.92