Tableau information
Concept source: d2d45a1 amino acid (a.a.) range (SER9)(ASN121)
nSSEs in this Concept: 8
String of secondary struct.elems. (SSEs) defining this concept: HHHEEHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER9) (LYS22) H1
(SER26) (LYS38) H2
(SER41) (GLY56) H3
(PHE57) (LYS62) E4
(ILE66) (SER71) E5
(GLU74) (VAL90) H6
(PHE95) (GLU106) H7
(SER109) (ASN121) H8
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 118.7° H2
H3 -83.0° 119.0° H3
E4 52.0° 129.6° -109.1° E4
E5 -105.0° 62.4° 56.9° 156.4° E5
H6 -152.9° -40.2° 94.7° -150.0° 53.4° H6
H7 -91.6° 42.1° -152.7° -87.7° -99.4° 78.1° H7
H8 69.2° -138.2° -20.1° 89.0° -75.8° -113.7° -157.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1okrb_ : (SER10) (ASN121) [view usage] : a.4.5.39 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |Penicillinase repressor |Methicillin resistance regulatory protein MecI |Staphylococcus aureus [TaxId: 1280]
d1sd6b_ : (SER9) (ASN121) [view usage] : a.4.5.39 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |Penicillinase repressor |Methicillin resistance regulatory protein MecI |Staphylococcus aureus [TaxId: 1280]
d1sd7a_ : (MSE16) (LEU120) [view usage] : a.4.5.39 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |Penicillinase repressor |Methicillin resistance regulatory protein MecI |Staphylococcus aureus [TaxId: 1280]
d1saxa_ : (SER9) (LYS122) [view usage] : a.4.5.39 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |Penicillinase repressor |Methicillin resistance regulatory protein MecI |Staphylococcus aureus [TaxId: 1280]
d1okra_ : (SER10) (LYS122) [view usage] : a.4.5.39 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |Penicillinase repressor |Methicillin resistance regulatory protein MecI |Staphylococcus aureus [TaxId: 1280]
d1sd4a_ : (SER9) (SER124) [view usage] : a.4.5.39 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |Penicillinase repressor |Penicillinase repressor BlaI |Staphylococcus aureus [TaxId: 1280]
d1sd6a_ : (SER9) (LYS122) [view usage] : a.4.5.39 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |Penicillinase repressor |Methicillin resistance regulatory protein MecI |Staphylococcus aureus [TaxId: 1280]
d1sd7b_ : (SER9) (LYS122) [view usage] : a.4.5.39 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |Penicillinase repressor |Methicillin resistance regulatory protein MecI |Staphylococcus aureus [TaxId: 1280]
d1xsda_ : (SER9) (LYS125) [view usage] : a.4.5.39 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |Penicillinase repressor |automated matches |Staphylococcus aureus [TaxId: 1280]
d2d45a1 : (SER9) (ASN121) [view usage] : a.4.5.39 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |Penicillinase repressor |Methicillin resistance regulatory protein MecI |Staphylococcus aureus [TaxId: 1280]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.4