Protein Concepts Dictionary

Tableau information

Concept source:  d2c0ja_  amino acid (a.a.) range (GLU17)(PHE167)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HHHEEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLU17)   (ASP33) H1
	   (ASP37)   (ARG62) H2
	   (PHE71)   (TYR86) H3
	   (ILE89)   (ASN95) E4
	  (ASP101)  (GLU108) E5
	  (LEU130)  (GLN143) H6
	  (ALA145)  (PHE150) E7
	  (THR161)  (PHE167) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
H2      150.2°   H2                                               
H3      103.9°   91.6°   H3                                        
E4       66.1° -106.1°  158.8°   E4                                 
E5     -107.2°   97.7°  -25.4°  136.6°   E5                          
H6      105.6°  -46.0°  126.7°  -74.5°  142.3°   H6                   
E7      -89.7°  119.8°  -54.1°  105.8°  -31.5°  162.7°   E7            
E8       82.0°  -70.0°  139.6°  -60.0°  163.0°  -24.0°  165.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2cfha_ :    (GLU17)  (PHE167)   [view usage] : d.278.1.2 |Ligand-binding domain in the NO signalling and Golgi transport |Ligand-binding domain in the NO signalling and Golgi transport |TRAPP components |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1sz7a_ :    (GLU17)  (PHE167)   [view usage] : d.278.1.2 |Ligand-binding domain in the NO signalling and Golgi transport |Ligand-binding domain in the NO signalling and Golgi transport |TRAPP components |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3kxca_ :    (SER16)  (PHE167)   [view usage] : d.278.1.2 |Ligand-binding domain in the NO signalling and Golgi transport |Ligand-binding domain in the NO signalling and Golgi transport |TRAPP components |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2c0ja_ :    (GLU17)  (PHE167)   [view usage] : d.278.1.2 |Ligand-binding domain in the NO signalling and Golgi transport |Ligand-binding domain in the NO signalling and Golgi transport |TRAPP components |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1wc9a_ :    (ASP37)  (PHE167)   [view usage] : d.278.1.2 |Ligand-binding domain in the NO signalling and Golgi transport |Ligand-binding domain in the NO signalling and Golgi transport |TRAPP components |Trafficking protein particle complex subunit 3, Bet3 homolog |Mouse (Mus musculus) [TaxId: 10090]
 d1wc8a_ :    (LEU18)  (PHE167)   [view usage] : d.278.1.2 |Ligand-binding domain in the NO signalling and Golgi transport |Ligand-binding domain in the NO signalling and Golgi transport |TRAPP components |Trafficking protein particle complex subunit 3, Bet3 homolog |Mouse (Mus musculus) [TaxId: 10090]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.278