Protein Concepts Dictionary

Tableau information

Concept source:  d4adla_  amino acid (a.a.) range (ASN263)(ALA415)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HHEHHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASN263)  (GLN268) H1
	  (ASP272)  (SER300) H2
	  (GLU308)  (LEU314) E3
	  (LEU329)  (ASN353) H4
	  (ILE362)  (LEU391) H5
	  (LEU391)  (VAL395) E6
	  (VAL395)  (SER404) H7
	  (SER405)  (ALA415) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
H2      -55.6°   H2                                               
E3      -75.0° -110.9°   E3                                        
H4      117.1° -159.8°   82.2°   H4                                 
H5       80.9°   28.1°  111.9° -160.3°   H5                          
E6       90.1°   43.7°  153.5° -124.3°  -43.0°   E6                   
H7      100.0°   90.0°  148.1°  -72.1°  -98.0°  -55.0°   H7            
H8      145.1° -101.9°  139.7°   73.9°  -86.7°  -59.7°  -49.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3ocea_ :   (ASN262)  (ALA429)   [view usage] : a.127.1.0 |L-aspartase-like |L-aspartase-like |automated matches |automated matches |Brucella melitensis [TaxId: 359391]
 d4adlb_ :   (ASN263)  (ALA415)   [view usage] : a.127.1.0 |L-aspartase-like |L-aspartase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d3gtda_ :   (GLY241)  (GLY432)   [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |automated matches |Rickettsia prowazekii [TaxId: 272947]
 d1j3ua_ :   (HIS263)  (ALA411)   [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |L-aspartate ammonia lyase |Bacillus sp., ym55-1 [TaxId: 1409]
 d3rrpa_ :   (ASP262)  (ALA414)   [view usage] : a.127.1.0 |L-aspartase-like |L-aspartase-like |automated matches |automated matches |Mycobacterium abscessus [TaxId: 561007]
 d3qbpb_ :   (ASN268)  (PRO416)   [view usage] : a.127.1.0 |L-aspartase-like |L-aspartase-like |automated matches |automated matches |Mycobacterium marinum [TaxId: 216594]
 d1jswb_ :   (TYR245)  (ASN416)   [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |L-aspartate ammonia lyase |Escherichia coli [TaxId: 562]
 d4adla_ :   (ASN263)  (ALA415)   [view usage] : a.127.1.0 |L-aspartase-like |L-aspartase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d3ocec_ :   (GLY271)  (ALA410)   [view usage] : a.127.1.0 |L-aspartase-like |L-aspartase-like |automated matches |automated matches |Brucella melitensis [TaxId: 359391]
 d1tj7a_ :   (ASN224)  (GLY378)   [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Escherichia coli [TaxId: 562]
 d1jswc_ :   (SER246)  (THR413)   [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |L-aspartate ammonia lyase |Escherichia coli [TaxId: 562]
 d4apba_ :   (ASN263)  (ALA415)   [view usage] : a.127.1.0 |L-aspartase-like |L-aspartase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.127