Protein Concepts Dictionary

Tableau information

Concept source:  d3iewa_  amino acid (a.a.) range (ASP67)(GLU159)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HHEHHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASP67)   (ALA73) H1
	   (ARG76)   (ALA89) H2
	   (ARG94)  (ALA102) E3
	  (LEU107)  (ILE111) H4
	  (ILE111)  (ASP123) H5
	  (VAL129)  (THR135) E6
	  (GLY140)  (GLY145) H7
	  (GLY147)  (GLU159) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
H2     -121.4°   H2                                               
E3      -70.7°  149.1°   E3                                        
H4      103.4°  -41.2°  169.7°   H4                                 
H5      142.6°  -40.4°  144.4°  -39.6°   H5                          
E6      -72.0°  133.3°  -17.2° -170.0°  145.4°   E6                   
H7      -51.6° -136.1°  -74.5°   95.2°  113.5°  -88.8°   H7            
E8      111.3°  -26.2°  175.3°  -15.0°  -35.1°  158.4° -110.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3iewa_ :    (ASP67)  (GLU159)   [view usage] : d.79.5.0 |Bacillus chorismate mutase-like |IpsF-like |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 28450]
 d3f0ea_ :    (ASP67)  (ARG158)   [view usage] : d.79.5.0 |Bacillus chorismate mutase-like |IpsF-like |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 28450]
 d4c8ib_ :    (ASP67)  (VAL157)   [view usage] : d.79.5.0 |Bacillus chorismate mutase-like |IpsF-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
 d4c8ea_ :    (SER64)  (VAL157)   [view usage] : d.79.5.0 |Bacillus chorismate mutase-like |IpsF-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
 d3f0fa_ :    (ASP58)  (VAL156)   [view usage] : d.79.5.0 |Bacillus chorismate mutase-like |IpsF-like |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 28450]
 d3ghza_ :    (ILE57)  (LYS156)   [view usage] : d.79.5.1 |Bacillus chorismate mutase-like |IpsF-like |IpsF-like |automated matches |Salmonella typhimurium [TaxId: 90371]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.79