Tableau information
Concept source: d1dppa_ amino acid (a.a.) range (ASP278)(GLY396)
nSSEs in this Concept: 8
String of secondary struct.elems. (SSEs) defining this concept: HHEHEHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP278) (VAL289) H1
(LYS291) (GLN300) H2
(ALA302) (LYS307) E3
(PRO328) (GLY339) H4
(ILE346) (MET351) E5
(ASN360) (GLY376) H6
(GLY376) (GLU385) E7
(GLU385) (GLY396) H8
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 53.8° H2
E3 -147.4° 157.5° E3
H4 -160.7° -123.8° 40.7° H4
E5 -59.5° -22.5° 142.7° 127.1° E5
H6 112.4° 159.5° -40.8° -63.3° 168.7° H6
E7 -82.5° -29.4° 128.1° 99.4° -29.0° 162.3° E7
H8 -147.3° -154.1° 6.0° 43.5° -137.3° 45.3° 125.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1xoca1 : (LYS281) (GLN404) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Oligo-peptide binding protein (OPPA) |Bacillus subtilis [TaxId: 1423]
d3tpaa_ : (VAL286) (GLY403) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Haemophilus parasuis [TaxId: 456298]
d1dpea_ : (VAL279) (GLY396) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Dipeptide-binding protein |Escherichia coli [TaxId: 562]
d1uqwa_ : (PRO260) (LYS372) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Hypothetical protein YliB |Escherichia coli [TaxId: 562]
d3m8ua_ : (VAL303) (GLY420) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Haemophilus parasuis [TaxId: 557723]
d1dppa_ : (ASP278) (GLY396) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Dipeptide-binding protein |Escherichia coli [TaxId: 562]
d1b05a_ : (VAL287) (GLY407) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Oligo-peptide binding protein (OPPA) |Salmonella typhimurium [TaxId: 90371]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.94