Protein Concepts Dictionary

Tableau information

Concept source:  d2igsf_  amino acid (a.a.) range (ILE93)(ALA214)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HHEEHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ILE93)  (GLY112) H1
	  (GLY112)  (LYS120) H2
	  (VAL130)  (ALA136) E3
	  (GLU143)  (SER149) E4
	  (THR158)  (MSE165) H5
	  (GLU169)  (VAL175) H6
	  (ASN187)  (LEU199) H7
	  (ARG200)  (ALA214) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
H2      104.9°   H2                                               
E3       28.3°   89.6°   E3                                        
E4     -100.9° -133.2°  127.2°   E4                                 
H5      116.6° -131.3°  138.5°   20.1°   H5                          
H6      -74.8°   31.1°  -59.0°  148.9°  159.4°   H6                   
H7      -95.7° -136.2°  122.0°    5.2°   24.2° -147.9°   H7            
H8       45.2°  109.1°  -29.9° -116.9°  118.0°  -82.4°  112.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2igse_ :    (ILE93)  (ALA214)   [view usage] : d.2.1.11 |Lysozyme-like |Lysozyme-like |PA2222-like |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d2igsa1 :    (ILE93)  (ALA214)   [view usage] : d.2.1.11 |Lysozyme-like |Lysozyme-like |PA2222-like |Hypothetical protein PA2222 |Pseudomonas aeruginosa [TaxId: 287]
 d2igsg_ :    (ILE93)  (ALA214)   [view usage] : d.2.1.11 |Lysozyme-like |Lysozyme-like |PA2222-like |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d2igsc_ :    (ILE93)  (ALA214)   [view usage] : d.2.1.11 |Lysozyme-like |Lysozyme-like |PA2222-like |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d2igsf_ :    (ILE93)  (ALA214)   [view usage] : d.2.1.11 |Lysozyme-like |Lysozyme-like |PA2222-like |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d2igsb_ :    (ILE93)  (ILE215)   [view usage] : d.2.1.11 |Lysozyme-like |Lysozyme-like |PA2222-like |automated matches |Pseudomonas aeruginosa [TaxId: 287]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   d.2