Protein Concepts Dictionary

Tableau information

Concept source:  d1lzga_  amino acid (a.a.) range (CYS6)(ASN113)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HHEEHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (CYS6)   (GLY16) H1
	   (LEU25)   (PHE34) H2
	   (GLN41)   (THR47) E3
	   (GLY49)   (ILE55) E4
	   (ASN59)   (CYS64) H5
	   (PRO79)   (SER85) H6
	   (THR89)  (ASP101) H7
	  (TRP108)  (ASN113) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
H2      127.4°   H2                                               
E3      -82.2°   70.2°   E3                                        
E4       96.7° -126.0°  155.9°   E4                                 
H5       34.7° -124.3° -113.9°   73.7°   H5                          
H6      122.1° -108.6°  135.6°   29.3°  103.0°   H6                   
H7      -67.2°  108.8°   40.3° -117.2°  100.9° -110.8°   H7            
H8     -115.0°  107.2°   86.3°  -72.3°  128.2°  -50.7°  -63.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1flwa_ :     (GLY4)  (ASN113)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Chicken (Gallus gallus) [TaxId: 9031]
 d1iota_ :     (GLY4)  (ASN113)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Chicken (Gallus gallus) [TaxId: 9031]
 d2z2ea_ :     (CYS6)  (LYS113)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |automated matches |Dog (Canis familiaris) [TaxId: 9615]
 d1nbyc_ :   (GLY604)  (ASN713)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Chicken (Gallus gallus) [TaxId: 9031]
 d2fbda_ :     (THR4)  (TYR110)   [view usage] : d.2.1.0 |Lysozyme-like |Lysozyme-like |automated matches |automated matches |House fly (Musca domestica) [TaxId: 7370]
 d1h6ma_ :     (GLY4)  (ASN113)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Chicken (Gallus gallus) [TaxId: 9031]
 d1iosa_ :     (CYS6)  (ASN113)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Chicken (Gallus gallus) [TaxId: 9031]
 d1ndgc_ :   (GLY604)  (ASN713)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Chicken (Gallus gallus) [TaxId: 9031]
 d1lsma_ :     (GLY4)  (ASN113)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Chicken (Gallus gallus) [TaxId: 9031]
 d1uifa_ :     (GLY4)  (ASN113)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Chicken (Gallus gallus) [TaxId: 9031]
 d1heoa_ :     (GLY4)  (ASN113)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Chicken (Gallus gallus) [TaxId: 9031]
 d1ir8a_ :     (CYS6)  (ASN113)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Chicken (Gallus gallus) [TaxId: 9031]
 d1flqa_ :     (GLY4)  (ASN113)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Chicken (Gallus gallus) [TaxId: 9031]
 d1uica_ :     (GLY4)  (ASN113)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Chicken (Gallus gallus) [TaxId: 9031]
 d1iora_ :     (CYS6)  (ASN113)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Chicken (Gallus gallus) [TaxId: 9031]
 d1gpqd_ :     (CYS6)  (ASN113)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Chicken (Gallus gallus) [TaxId: 9031]
 d1ip7a_ :     (CYS6)  (ASN114)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d2cwia_ :     (SER4)  (LYS113)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Dog (Canis familiaris), milk [TaxId: 9615]
 d1bqly_ :     (GLY4)  (ASN113)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Bobwhite quail (Colinus virginianus) [TaxId: 9014]
 d2goia_ :     (SER4)  (HIS112)   [view usage] : d.2.1.0 |Lysozyme-like |Lysozyme-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1kxya_ :     (GLY4)  (ASN113)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Chicken (Gallus gallus) [TaxId: 9031]
 d1fn5a_ :     (GLY4)  (ASN113)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Chicken (Gallus gallus) [TaxId: 9031]
 d1lzda_ :     (CYS6)  (ASN113)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Chicken (Gallus gallus) [TaxId: 9031]
 d1lzga_ :     (CYS6)  (ASN113)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Chicken (Gallus gallus) [TaxId: 9031]
 d1kxwa_ :     (CYS6)  (ASN113)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Chicken (Gallus gallus) [TaxId: 9031]
 d2iffy_ :     (ARG5)  (ASN113)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Chicken (Gallus gallus) [TaxId: 9031]
 d1kxxa_ :     (CYS6)  (ASN113)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Chicken (Gallus gallus) [TaxId: 9031]
 d1ioqa_ :     (CYS6)  (ASN113)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Chicken (Gallus gallus) [TaxId: 9031]
 d2eqla_ :    (GLU16)  (LYS113)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Horse (Equus caballus), milk [TaxId: 9796]
 d1hera_ :     (CYS6)  (ASN113)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Chicken (Gallus gallus) [TaxId: 9031]
 d1lsga1 :     (ARG6)  (ASN114)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Chicken (Gallus gallus) [TaxId: 9031]
 d1bb3a_ :     (CYS6)  (ASN114)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d3ln2a_ :     (GLU4)  (ASN114)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d3ojpa_ :     (GLY4)  (ASN113)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Chicken (Gallus gallus) [TaxId: 9031]
 d1flua_ :     (GLY4)  (ASN113)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Chicken (Gallus gallus) [TaxId: 9031]
 d1gpqc_ :     (GLY4)  (ASN113)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Chicken (Gallus gallus) [TaxId: 9031]
 d1juga_ :     (LYS5)  (SER113)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Australian echidna (Tachyglossus aculeatus) [TaxId: 9261]
 d1ir7a_ :     (GLY4)  (ASN113)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Chicken (Gallus gallus) [TaxId: 9031]
 d193la_ :     (GLY4)  (ASN113)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Chicken (Gallus gallus) [TaxId: 9031]
 d1ir9a_ :     (GLY4)  (ASN113)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Chicken (Gallus gallus) [TaxId: 9031]
 d1flya_ :     (GLY4)  (ASN113)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Chicken (Gallus gallus) [TaxId: 9031]
 d1uiaa_ :     (CYS6)  (ASN113)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Chicken (Gallus gallus) [TaxId: 9031]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   d.2