Protein Concepts Dictionary

Tableau information

Concept source:  d3tpza_  amino acid (a.a.) range (LYS142)(ASN267)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HHEEHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LYS142)  (LEU148) H1
	  (GLY158)  (TYR167) H2
	  (ASN169)  (PRO178) E3
	  (VAL187)  (PRO196) E4
	  (VAL207)  (ARG221) H5
	  (THR224)  (LEU229) H6
	  (SER234)  (GLY242) H7
	  (SER253)  (ASN267) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
H2      -60.9°   H2                                               
E3     -163.8°  126.2°   E3                                        
E4       34.5°   34.7°  158.5°   E4                                 
H5      119.3°  157.6°  -47.8°  153.5°   H5                          
H6      -97.0°  -81.7°   98.5°  -72.6°  119.2°   H6                   
H7       79.7°   53.2°  -93.7°   78.7° -104.4°  130.4°   H7            
H8      -62.4°  -78.6°  130.8°  -51.0°  122.5°  -37.7°  129.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3ftca_ :   (GLN129)  (SER232)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Aquifex aeolicus [TaxId: 224324]
 d3ftda_ :   (LYS130)  (SER246)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Aquifex aeolicus [TaxId: 224324]
 d3fuxc_ :   (LYS145)  (ASP256)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d3tpzb_ :   (LYS142)  (ALA265)   [view usage] : c.66.1.24 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |rRNA adenine dimethylase-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d1qyra_ :   (GLU143)  (ALA268)   [view usage] : c.66.1.24 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |rRNA adenine dimethylase-like |High level kasugamycin resistance protein KsgA |Escherichia coli [TaxId: 562]
 d4jxja_ :   (LYS145)  (ILE268)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Rickettsia bellii [TaxId: 336407]
 d3fuxa_ :   (LYS145)  (GLU268)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d3fuua_ :   (LYS145)  (ASP256)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d3tpza_ :   (LYS142)  (ASN267)   [view usage] : c.66.1.24 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |rRNA adenine dimethylase-like |automated matches |Escherichia coli K-12 [TaxId: 83333]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.66