Tableau information
Concept source: d2pccb_ amino acid (a.a.) range (SER2)(GLU103)
nSSEs in this Concept: 8
String of secondary struct.elems. (SSEs) defining this concept: HHEEHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER2) (THR12) H1
(THR12) (CYS17) H2
(CYS17) (GLU21) E3
(VAL28) (GLY34) E4
(ASP50) (ASN56) H5
(ASP60) (ASN70) H6
(ASN70) (ILE75) H7
(LYS87) (GLU103) H8
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -51.5° H2
E3 -134.2° -86.5° E3
E4 -157.7° -106.2° -28.3° E4
H5 -146.0° -105.3° -51.2° -26.5° H5
H6 43.2° 94.5° -155.6° -159.0° 149.3° H6
H7 -82.9° -50.4° 82.5° 80.5° 63.8° 116.8° H7
H8 -90.6° -44.7° 43.7° -69.3° -83.0° 126.9° -67.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4gedb_ : (ASP13) (THR111) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |automated matches |Leishmania major [TaxId: 5664]
d4dy9a_ : (ASP13) (GLU110) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |automated matches |Leishmania major [TaxId: 5664]
d2pccb_ : (SER2) (GLU103) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |Mitochondrial cytochrome c |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2b12b1 : (SER2) (GLU103) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |Mitochondrial cytochrome c |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2jtib_ : (SER2) (GLU103) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |Mitochondrial cytochrome c |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1u74b_ : (SER7) (GLU108) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |Mitochondrial cytochrome c |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2gb8b_ : (ALA3) (GLU103) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |Mitochondrial cytochrome c |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.3