Tableau information
Concept source: d1k78b_ amino acid (a.a.) range (GLN336)(CYS416)
nSSEs in this Concept: 8
String of secondary struct.elems. (SSEs) defining this concept: HHEEHHEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLN336) (ASP347) H1
(LYS348) (PHE353) H2
(PHE353) (ASP359) E3
(TRP361) (ASP367) E4
(ASP367) (ARG378) H5
(TYR386) (TYR397) H6
(ILE401) (GLY407) E7
(TYR410) (CYS416) E8
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -109.4° H2
E3 -87.6° -90.6° E3
E4 83.5° 64.7° 148.9° E4
H5 119.2° -125.4° -113.8° 96.5° H5
H6 -109.6° -103.3° -31.4° -165.2° 83.2° H6
E7 66.0° -44.0° 81.8° -67.3° -163.0° -111.0° E7
E8 -108.3° 132.5° -63.3° 147.7° 51.3° 35.8° 145.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3wtsc_ : (GLN336) (CYS416) [view usage] : a.4.5.21 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ets domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3ri4a_ : (GLN336) (CYS416) [view usage] : a.4.5.21 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ets domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1k78f_ : (GLN336) (CYS416) [view usage] : a.4.5.21 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ets domain |ETS-1 transcription factor, residues 331-440 |Mouse (Mus musculus) [TaxId: 10090]
d2nnya_ : (GLN336) (VAL415) [view usage] : a.4.5.21 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ets domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3wtyc_ : (GLN336) (CYS416) [view usage] : a.4.5.21 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ets domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1pp8u_ : (PHE34) (SER108) [view usage] : a.4.5.44 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |39 kda initiator binding protein, IBP39, N-terminal domain |39 kda initiator binding protein, IBP39, N-terminal domain |Trichomonas vaginalis [TaxId: 5722]
d4avpa_ : (LEU337) (ASP417) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1gvja_ : (LEU337) (CYS416) [view usage] : a.4.5.21 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ets domain |ETS-1 transcription factor, residues 331-440 |Human (Homo sapiens) [TaxId: 9606]
d2daoa_ : (LEU10) (PHE89) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2lf7a_ : (LEU337) (LYS417) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1puef_ : (ARG173) (SER255) [view usage] : a.4.5.21 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ets domain |Transcription factor PU.1, residues 171-259 |Mouse (Mus musculus) [TaxId: 10090]
d1md0a_ : (LEU337) (CYS416) [view usage] : a.4.5.21 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ets domain |ETS-1 transcription factor, residues 331-440 |Mouse (Mus musculus) [TaxId: 10090]
d1k79a_ : (LEU337) (CYS416) [view usage] : a.4.5.21 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ets domain |ETS-1 transcription factor, residues 331-440 |Mouse (Mus musculus) [TaxId: 10090]
d1k6oa_ : (THR306) (SER386) [view usage] : a.4.5.21 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ets domain |Serum response factor accessory protein 1a, SAP-1 |Human (Homo sapiens) [TaxId: 9606]
d1k78b_ : (GLN336) (CYS416) [view usage] : a.4.5.21 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ets domain |ETS-1 transcription factor, residues 331-440 |Mouse (Mus musculus) [TaxId: 10090]
d3wu0a_ : (GLN336) (CYS416) [view usage] : a.4.5.21 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ets domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1bc7c_ : (LEU7) (SER86) [view usage] : a.4.5.21 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ets domain |Serum response factor accessory protein 1a, SAP-1 |Human (Homo sapiens) [TaxId: 9606]
d4irha_ : (LEU296) (PHE375) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3wtzb_ : (GLN336) (CYS416) [view usage] : a.4.5.21 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ets domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1pp8f_ : (PRO35) (SER108) [view usage] : a.4.5.44 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |39 kda initiator binding protein, IBP39, N-terminal domain |39 kda initiator binding protein, IBP39, N-terminal domain |Trichomonas vaginalis [TaxId: 5722]
d3wu1b_ : (GLN336) (CYS416) [view usage] : a.4.5.21 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ets domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4co8a_ : (GLN342) (GLU423) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1gvjb_ : (LEU337) (CYS416) [view usage] : a.4.5.21 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ets domain |ETS-1 transcription factor, residues 331-440 |Human (Homo sapiens) [TaxId: 9606]
d4irga_ : (LEU296) (PHE375) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.4