Protein Concepts Dictionary

Tableau information

Concept source:  d3nh0b_  amino acid (a.a.) range (SER91)(GLU213)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HEHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (SER91)  (ALA109) H1
	  (ARG114)  (HIS120) E2
	  (ASN123)  (SER137) H3
	  (ALA152)  (ALA158) H4
	  (LEU164)  (GLY172) H5
	  (SER177)  (SER182) H6
	  (SER182)  (GLY205) H7
	  (PRO208)  (GLU213) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
E2      118.4°   E2                                               
H3     -109.0°  130.2°   H3                                        
H4       50.2°  -68.3°  156.7°   H4                                 
H5       38.7°  -90.3° -120.9°   37.0°   H5                          
H6      -93.4° -145.6°  -32.5°  140.6°  124.0°   H6                   
H7      -20.5°  104.9° -124.9°   39.1°   46.3° -101.5°   H7            
H8       49.8°   69.2°  158.4°    5.3°   41.1° -137.5°   36.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.0°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3ngza_ :    (SER91)  (GLU214)   [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |automated matches |Escherichia coli [TaxId: 562]
 d3nh0a_ :    (HIS97)  (GLU213)   [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |automated matches |Escherichia coli [TaxId: 562]
 d3ngzb_ :    (SER91)  (GLU213)   [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |automated matches |Escherichia coli [TaxId: 562]
 d3nh0b_ :    (SER91)  (GLU213)   [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |automated matches |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.55