Tableau information
Concept source: d2npaa_ amino acid (a.a.) range (ASP301)(TYR464)
nSSEs in this Concept: 8
String of secondary struct.elems. (SSEs) defining this concept: HEHHHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP301) (MET325) H1
(ASN336) (THR340) E2
(THR340) (SER346) H3
(LYS349) (ALA367) H4
(ASP372) (CYS384) H5
(ASN393) (PRO417) H6
(LEU422) (LYS449) H7
(PRO458) (TYR464) H8
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -76.0° E2
H3 -116.8° 60.2° H3
H4 -79.9° -104.3° -149.7° H4
H5 147.1° 74.5° -33.2° 121.3° H5
H6 -23.5° -89.3° -139.7° -57.4° -163.0° H6
H7 99.9° 81.1° 35.0° -174.3° -61.6° 121.6° H7
H8 -107.2° -48.2° -76.2° 74.7° 61.5° -104.0° -110.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3sp9a_ : (GLY285) (LYS438) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Peroxisome proliferator-activated receptor delta, PPAR-DELTA |Human (Homo sapiens) [TaxId: 9606]
d2atha_ : (VAL322) (ILE472) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2gwxa_ : (LEU311) (TYR473) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Peroxisome proliferator-activated receptor delta, PPAR-DELTA |Human (Homo sapiens) [TaxId: 9606]
d2zk1a_ : (ASP310) (TYR473) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Peroxisome proliferator activated receptor gamma, PPAR-gamma |Human (Homo sapiens) [TaxId: 9606]
d1fm6d_ : (ASP310) (TYR473) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Peroxisome proliferator activated receptor gamma, PPAR-gamma |Human (Homo sapiens) [TaxId: 9606]
d2npaa_ : (ASP301) (TYR464) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Peroxisome proliferator activated receptor alpha, PPAR-alpha |Human (Homo sapiens) [TaxId: 9606]
d2zvta_ : (ASP310) (TYR473) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Peroxisome proliferator activated receptor gamma, PPAR-gamma |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.123