Tableau information
Concept source: d3cyva_ amino acid (a.a.) range (GLY122)(GLN221)
nSSEs in this Concept: 8
String of secondary struct.elems. (SSEs) defining this concept: HEHHHEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY122) (GLU134) H1
(PRO140) (GLY146) E2
(SER147) (GLY158) H3
(PHE164) (ASP174) H4
(PRO175) (GLY200) H5
(GLN202) (ASP208) E6
(ASP208) (LEU214) H7
(THR215) (GLN221) H8
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 160.9° E2
H3 134.1° -46.0° H3
H4 -119.2° 66.7° 106.6° H4
H5 -32.6° 163.9° 120.5° -118.3° H5
E6 135.8° -25.3° 50.5° -81.8° 159.5° E6
H7 -116.6° 47.4° 85.3° -63.7° -148.5° 34.9° H7
H8 -86.4° 112.7° 99.0° 80.4° -56.3° 137.4° 143.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.9° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2ejaa_ : (ALA115) (GLU213) [view usage] : c.1.22.0 |TIM beta/alpha-barrel |UROD/MetE-like |automated matches |automated matches |Aquifex aeolicus [TaxId: 63363]
d3gvva_ : (GLY132) (PHE232) [view usage] : c.1.22.1 |TIM beta/alpha-barrel |UROD/MetE-like |Uroporphyrinogen decarboxylase, UROD |Uroporphyrinogen decarboxylase, UROD |Human (Homo sapiens) [TaxId: 9606]
d2ejab_ : (ALA115) (GLU213) [view usage] : c.1.22.0 |TIM beta/alpha-barrel |UROD/MetE-like |automated matches |automated matches |Aquifex aeolicus [TaxId: 63363]
d3cyva_ : (GLY122) (GLN221) [view usage] : c.1.22.1 |TIM beta/alpha-barrel |UROD/MetE-like |Uroporphyrinogen decarboxylase, UROD |Uroporphyrinogen decarboxylase, UROD |Shigella flexneri [TaxId: 623]
d1j93a_ : (PRO127) (THR242) [view usage] : c.1.22.1 |TIM beta/alpha-barrel |UROD/MetE-like |Uroporphyrinogen decarboxylase, UROD |Uroporphyrinogen decarboxylase, UROD |Tobacco (Nicotiana tabacum), UROD-III [TaxId: 4097]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1