Protein Concepts Dictionary

Tableau information

Concept source:  d3os4a1  amino acid (a.a.) range (ALA17)(SER130)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HEHHHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ALA17)   (HIS28) H1
	   (ILE33)   (SER43) E2
	   (ALA51)   (LEU64) H3
	   (THR67)   (SER76) H4
	   (GLN81)   (PHE91) H5
	   (GLN97)  (ALA101) E6
	  (LYS106)  (ALA112) E7
	  (TRP115)  (SER130) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
E2      157.5°   E2                                               
H3      -60.4°  141.4°   H3                                        
H4      -76.9°  102.2°  -73.4°   H4                                 
H5      111.8°  -62.4° -127.1°  159.5°   H5                          
E6      129.0°  -30.4° -168.7°  113.2°  -46.7°   E6                   
E7      -35.9°  163.5°  -25.3°  -67.3°  130.7°  164.9°   E7            
H8      165.9°  -17.5°  129.8°  114.1°  -54.8°  -39.7°  155.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1vlpa1 :    (LYS16)  (ILE149)   [view usage] : d.41.2.2 |alpha/beta-Hammerhead |Nicotinate/Quinolinate PRTase N-terminal domain-like |Monomeric nicotinate phosphoribosyltransferase N-terminal domain-like |Nicotinate phosphoribosyltransferase, N-terminal domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d2f7fa2 :    (TYR17)  (LEU126)   [view usage] : d.41.2.1 |alpha/beta-Hammerhead |Nicotinate/Quinolinate PRTase N-terminal domain-like |NadC N-terminal domain-like |Putative nicotinate phosphoribosyltransferase EF2626 |Enterococcus faecalis [TaxId: 1351]
 d1yira2 :    (PHE21)  (PRO143)   [view usage] : d.41.2.2 |alpha/beta-Hammerhead |Nicotinate/Quinolinate PRTase N-terminal domain-like |Monomeric nicotinate phosphoribosyltransferase N-terminal domain-like |Nicotinate phosphoribosyltransferase, N-terminal domain |Pseudomonas aeruginosa [TaxId: 287]
 d3os4b1 :    (ALA17)  (ARG136)   [view usage] : d.41.2.0 |alpha/beta-Hammerhead |Nicotinate/Quinolinate PRTase N-terminal domain-like |automated matches |automated matches |Yersinia pestis [TaxId: 214092]
 d4mzya1 :    (MET16)  (LEU126)   [view usage] : d.41.2.1 |alpha/beta-Hammerhead |Nicotinate/Quinolinate PRTase N-terminal domain-like |NadC N-terminal domain-like |Putative nicotinate phosphoribosyltransferase EF2626 |Enterococcus faecalis [TaxId: 1351]
 d1yirb2 :    (PHE21)  (PRO143)   [view usage] : d.41.2.2 |alpha/beta-Hammerhead |Nicotinate/Quinolinate PRTase N-terminal domain-like |Monomeric nicotinate phosphoribosyltransferase N-terminal domain-like |Nicotinate phosphoribosyltransferase, N-terminal domain |Pseudomonas aeruginosa [TaxId: 287]
 d3os4a1 :    (ALA17)  (SER130)   [view usage] : d.41.2.0 |alpha/beta-Hammerhead |Nicotinate/Quinolinate PRTase N-terminal domain-like |automated matches |automated matches |Yersinia pestis [TaxId: 214092]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.41