Tableau information
Concept source: d2lbpa_ amino acid (a.a.) range (GLY238)(GLN335)
nSSEs in this Concept: 8
String of secondary struct.elems. (SSEs) defining this concept: HEHHHEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY238) (MET244) H1
(MET244) (MET248) E2
(GLN259) (LYS269) H3
(GLY274) (GLY295) H4
(LEU300) (ALA308) H5
(ALA308) (VAL314) E6
(PRO317) (ASP321) E7
(PHE329) (GLN335) E8
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -58.0° E2
H3 145.0° 88.5° H3
H4 26.7° -31.7° 120.1° H4
H5 80.3° 136.7° -128.4° 106.9° H5
E6 -132.1° 119.5° -53.3° 135.3° -78.8° E6
E7 85.7° -77.9° -97.9° -77.9° -112.5° 142.2° E7
E8 -131.2° 154.6° -75.2° 154.2° 53.4° -35.2° 123.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1usga_ : (GLY238) (ALA338) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Leucine-binding protein |Escherichia coli [TaxId: 562]
d1z15a_ : (GLY238) (ASP333) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2lbpa_ : (GLY238) (GLN335) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Leucine-binding protein |Escherichia coli [TaxId: 562]
d2liva_ : (GLY238) (ASP333) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Leucine-,isoleucine-,valine-binding (LIV) protein |Escherichia coli [TaxId: 562]
d3ipca_ : (ASN231) (TRP335) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
d4n0qb_ : (GLY260) (ASP361) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Brucella melitensis [TaxId: 224914]
d1qo0a_ : (GLU243) (ALA347) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Amide receptor/negative regulator of the amidase operon (AmiC) |Pseudomonas aeruginosa [TaxId: 287]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.93