Protein Concepts Dictionary

Tableau information

Concept source:  d2xbfa_  amino acid (a.a.) range (ASP521)(GLY649)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HEHHEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP521)  (LEU533) H1
	  (LYS542)  (ARG548) E2
	  (LEU553)  (VAL563) H3
	  (ARG565)  (ALA571) H4
	  (ARG572)  (ASP578) E5
	  (TYR585)  (GLU599) H6
	  (ASN623)  (ASN628) H7
	  (HIS631)  (GLY649) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
E2      106.6°   E2                                               
H3       55.5°  152.2°   H3                                        
H4     -120.0°  -83.0°  123.6°   H4                                 
E5       92.6°  -18.1°  146.2°  -79.8°   E5                          
H6      109.3°   55.0° -107.3° -122.6°   70.1°   H6                   
H7      -48.7°   68.5° -102.9°   85.8°   50.7°  108.3°   H7            
H8     -104.2° -125.0°   82.2°  -42.0° -120.2° -144.5°  102.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.5°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4bbna_ :   (ARG520)  (GLY648)   [view usage] : d.148.1.0 |Hect, E3 ligase catalytic domain |Hect, E3 ligase catalytic domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2xbfa_ :   (ASP521)  (GLY649)   [view usage] : d.148.1.0 |Hect, E3 ligase catalytic domain |Hect, E3 ligase catalytic domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3jw0c_ :   (PHE575)  (GLY704)   [view usage] : d.148.1.0 |Hect, E3 ligase catalytic domain |Hect, E3 ligase catalytic domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4be8a_ :   (TYR522)  (GLY648)   [view usage] : d.148.1.0 |Hect, E3 ligase catalytic domain |Hect, E3 ligase catalytic domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.148