Protein Concepts Dictionary

Tableau information

Concept source:  d4hp8a_  amino acid (a.a.) range (SER99)(ASP241)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HEHEHHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (SER99)  (LYS128) H1
	  (GLY132)  (ILE137) E2
	  (VAL149)  (TRP170) H3
	  (GLY174)  (TYR184) E4
	  (GLU191)  (ASP196) H5
	  (ASP196)  (ILE207) H6
	  (HIS214)  (SER227) H7
	  (GLY235)  (ASP241) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
E2     -164.7°   E2                                               
H3      -15.8° -159.2°   H3                                        
E4      149.6°  -17.8° -154.2°   E4                                 
H5     -138.0°   27.0° -135.0°  -22.4°   H5                          
H6      -42.2°  126.0°  -34.2° -121.2° -100.8°   H6                   
H7      -32.7°  153.4°   20.4°  164.6°  142.4°   47.3°   H7            
E8      128.0°  -40.4°  137.4°  -22.7°  -33.3° -111.7°  157.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.5°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4nbwa_ :   (LEU135)  (ASP257)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Plesiocystis pacifica [TaxId: 391625]
 d1pwxa_ :   (VAL115)  (ALA240)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Halohydrin dehalogenase HheC |Agrobacterium tumefaciens [TaxId: 358]
 d4q9na_ :   (TYR154)  (ASP282)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Chlamydia trachomatis [TaxId: 1340853]
 d4ixwb_ :   (SER117)  (ALA240)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Rhizobium radiobacter [TaxId: 358]
 d2wywa_ :   (TYR123)  (ASP249)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d3uxyb_ :   (LEU100)  (ASN238)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Rhodobacter sphaeroides [TaxId: 272943]
 d4hp8b_ :    (SER99)  (ASP241)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
 d4hp8a_ :    (SER99)  (ASP241)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
 d4iboa_ :   (THR109)  (ASP249)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Agrobacterium fabrum [TaxId: 176299]
 d3rroa_ :   (ARG127)  (ASN242)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Vibrio cholerae [TaxId: 243277]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.2