Protein Concepts Dictionary

Tableau information

Concept source:  d3k7pa_  amino acid (a.a.) range (ALA54)(ALA153)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HEHEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ALA54)   (LYS60) H1
	   (GLU63)   (ALA69) E2
	   (GLY72)   (PRO83) H3
	   (GLY84)   (CYS90) E4
	   (HIS93)  (ASP104) H5
	  (ASN106)  (GLY111) E6
	  (VAL117)  (GLN129) H7
	  (ARG137)  (ALA153) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
E2     -167.4°   E2                                               
H3      -35.8°  144.8°   H3                                        
E4      130.9°  -45.3° -164.6°   E4                                 
H5      -35.7°  142.3°   -7.1°  159.3°   H5                          
E6      166.4°  -11.6°  155.8°  -36.1°  153.8°   E6                   
H7      -12.3°  163.2°  -23.6°  142.4°  -23.5°  172.7°   H7            
H8     -111.6°   72.5°  -75.9°  117.2°  -77.3°   81.1°  -99.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3he8a_ :    (TYR42)  (SER148)   [view usage] : c.121.1.1 |Ribose/Galactose isomerase RpiB/AlsB |Ribose/Galactose isomerase RpiB/AlsB |Ribose/Galactose isomerase RpiB/AlsB |automated matches |Clostridium thermocellum [TaxId: 203119]
 d3k7pa_ :    (ALA54)  (ALA153)   [view usage] : c.121.1.0 |Ribose/Galactose isomerase RpiB/AlsB |Ribose/Galactose isomerase RpiB/AlsB |automated matches |automated matches |Trypanosoma cruzi [TaxId: 353153]
 d3sdwa_ :    (HIS55)  (LYS157)   [view usage] : c.121.1.0 |Ribose/Galactose isomerase RpiB/AlsB |Ribose/Galactose isomerase RpiB/AlsB |automated matches |automated matches |Coccidioides immitis [TaxId: 246410]
 d2vvrb_ :    (PRO44)  (GLN146)   [view usage] : c.121.1.0 |Ribose/Galactose isomerase RpiB/AlsB |Ribose/Galactose isomerase RpiB/AlsB |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3k7sa_ :    (TYR46)  (HIS152)   [view usage] : c.121.1.0 |Ribose/Galactose isomerase RpiB/AlsB |Ribose/Galactose isomerase RpiB/AlsB |automated matches |automated matches |Trypanosoma cruzi [TaxId: 353153]
 d4em8a_ :    (ASP44)  (LEU141)   [view usage] : c.121.1.0 |Ribose/Galactose isomerase RpiB/AlsB |Ribose/Galactose isomerase RpiB/AlsB |automated matches |automated matches |Anaplasma phagocytophilum [TaxId: 212042]
 d4em8b_ :    (TYR45)  (LEU141)   [view usage] : c.121.1.0 |Ribose/Galactose isomerase RpiB/AlsB |Ribose/Galactose isomerase RpiB/AlsB |automated matches |automated matches |Anaplasma phagocytophilum [TaxId: 212042]
 d4lfkb_ :    (TYR42)  (ASN143)   [view usage] : c.121.1.0 |Ribose/Galactose isomerase RpiB/AlsB |Ribose/Galactose isomerase RpiB/AlsB |automated matches |automated matches |Lactobacillus rhamnosus [TaxId: 568704]
 d1nn4a_ :    (TYR43)  (GLU145)   [view usage] : c.121.1.1 |Ribose/Galactose isomerase RpiB/AlsB |Ribose/Galactose isomerase RpiB/AlsB |Ribose/Galactose isomerase RpiB/AlsB |Alternate ribose 5-phosphate isomerase B, RpiB |Escherichia coli [TaxId: 562]
 d3k7pb_ :    (ALA54)  (ALA153)   [view usage] : c.121.1.0 |Ribose/Galactose isomerase RpiB/AlsB |Ribose/Galactose isomerase RpiB/AlsB |automated matches |automated matches |Trypanosoma cruzi [TaxId: 353153]
 d3k7oa_ :    (TYR46)  (HIS152)   [view usage] : c.121.1.0 |Ribose/Galactose isomerase RpiB/AlsB |Ribose/Galactose isomerase RpiB/AlsB |automated matches |automated matches |Trypanosoma cruzi [TaxId: 353153]
 d1nn4b_ :    (TYR43)  (GLN146)   [view usage] : c.121.1.1 |Ribose/Galactose isomerase RpiB/AlsB |Ribose/Galactose isomerase RpiB/AlsB |Ribose/Galactose isomerase RpiB/AlsB |Alternate ribose 5-phosphate isomerase B, RpiB |Escherichia coli [TaxId: 562]
 d1nn4d_ :    (PRO44)  (GLN146)   [view usage] : c.121.1.1 |Ribose/Galactose isomerase RpiB/AlsB |Ribose/Galactose isomerase RpiB/AlsB |Ribose/Galactose isomerase RpiB/AlsB |Alternate ribose 5-phosphate isomerase B, RpiB |Escherichia coli [TaxId: 562]
 d3k7ob_ :    (ALA54)  (HIS152)   [view usage] : c.121.1.0 |Ribose/Galactose isomerase RpiB/AlsB |Ribose/Galactose isomerase RpiB/AlsB |automated matches |automated matches |Trypanosoma cruzi [TaxId: 353153]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 c.121