Protein Concepts Dictionary

Tableau information

Concept source:  d1qo5g_  amino acid (a.a.) range (LEU198)(GLY340)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HEHEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LEU198)  (HIS220) H1
	  (THR226)  (ASN231) E2
	  (PRO245)  (THR259) H3
	  (PRO265)  (SER271) E4
	  (SER275)  (LEU288) H5
	  (LYS296)  (GLY302) E6
	  (ARG303)  (TRP313) H7
	  (GLU321)  (GLY340) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
E2      160.1°   E2                                               
H3      -28.4°  141.1°   H3                                        
E4      137.9°  -27.9°  138.5°   E4                                 
H5      -69.4°  122.6°  -57.1°  150.5°   H5                          
E6       99.9°  -65.4°  109.4°  -38.3°  166.3°   E6                   
H7      110.8°  -66.6°  134.4°  -43.9° -152.8°  -38.0°   H7            
H8      -83.7°  104.0°  -63.2°  130.9°  -21.7°  154.4°  161.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3mbda_ :   (LEU201)  (GLY332)   [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Fungus (Encephalitozoon cuniculi) [TaxId: 6035]
 d3mmta_ :   (SER191)  (GLY332)   [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Bartonella henselae [TaxId: 38323]
 d3mmtc_ :   (SER191)  (GLY332)   [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Bartonella henselae [TaxId: 38323]
 d3mmtb_ :   (ILE192)  (GLY332)   [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Bartonella henselae [TaxId: 38323]
 d3mbfa_ :   (SER189)  (GLY332)   [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Fungus (Encephalitozoon cuniculi) [TaxId: 6035]
 d1ewda_ :   (LEU209)  (GLY340)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Fructose-1,6-bisphosphate aldolase |Rabbit (Oryctolagus cuniculus), muscle isozyme [TaxId: 9986]
 d1ewea_ :   (LEU209)  (GLY340)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Fructose-1,6-bisphosphate aldolase |Rabbit (Oryctolagus cuniculus), muscle isozyme [TaxId: 9986]
 d3aama_ :    (TRP83)  (ALA194)   [view usage] : c.1.15.0 |TIM beta/alpha-barrel |Xylose isomerase-like |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1