Protein Concepts Dictionary

Tableau information

Concept source:  d3j3bc_  amino acid (a.a.) range (ILE14)(ILE97)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HEHEHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ILE14)   (GLY25) H1
	   (GLY25)   (GLY30) E2
	   (GLY30)   (GLY41) H3
	   (LYS44)   (ALA49) E4
	   (PRO53)   (LYS68) H5
	   (GLY70)   (GLY76) E6
	   (ASN77)   (GLY86) H7
	   (CYS92)   (ILE97) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
E2     -104.9°   E2                                               
H3       73.5° -120.6°   H3                                        
E4     -131.4°  -46.9° -151.0°   E4                                 
H5       67.5°  137.5°   17.6° -161.0°   H5                          
E6     -118.7°  -70.0°  162.8°  -27.6°  151.7°   E6                   
H7      -49.9° -151.4°   70.0°  135.2°   53.0°  107.6°   H7            
E8       53.7°  148.0°   37.0°  165.0°   20.7°  138.9°   33.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1t0kb_ :    (ILE10)   (LEU93)   [view usage] : d.79.3.1 |Bacillus chorismate mutase-like |L30e-like |L30e/L7ae ribosomal proteins |Eukaryotic ribosomal protein L30 (L30e) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d4a19g_ :     (ASP8)   (LEU93)   [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Eukaryotic, cytoplasmic (60S subunit) |Tetrahymena thermophila [TaxId: 5911]
 d1go0a_ :     (ASP2)   (ASP87)   [view usage] : d.79.3.1 |Bacillus chorismate mutase-like |L30e-like |L30e/L7ae ribosomal proteins |Eukaryotic ribosomal protein L30 (L30e) |Thermococcus celer [TaxId: 2264]
 d1nmud_ :     (SER9)   (GLU94)   [view usage] : d.79.3.1 |Bacillus chorismate mutase-like |L30e-like |L30e/L7ae ribosomal proteins |Eukaryotic ribosomal protein L30 (L30e) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d2bo1a1 :     (ILE3)   (ASP87)   [view usage] : d.79.3.1 |Bacillus chorismate mutase-like |L30e-like |L30e/L7ae ribosomal proteins |Eukaryotic ribosomal protein L30 (L30e) |Thermococcus celer [TaxId: 2264]
 d1h7ma_ :     (ALA4)   (ASP87)   [view usage] : d.79.3.1 |Bacillus chorismate mutase-like |L30e-like |L30e/L7ae ribosomal proteins |Eukaryotic ribosomal protein L30 (L30e) |Thermococcus celer [TaxId: 2264]
 d1w40a1 :     (ASP2)   (ASP87)   [view usage] : d.79.3.1 |Bacillus chorismate mutase-like |L30e-like |L30e/L7ae ribosomal proteins |Eukaryotic ribosomal protein L30 (L30e) |Thermococcus celer [TaxId: 2264]
 d3u5ic_ :    (ILE10)   (GLU94)   [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Saccharomyces cerevisiae [TaxId: 559292]
 d3j3bc_ :    (ILE14)   (ILE97)   [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Homo sapiens [TaxId: 9606]
 d1w41a1 :     (ASP2)   (ASP87)   [view usage] : d.79.3.1 |Bacillus chorismate mutase-like |L30e-like |L30e/L7ae ribosomal proteins |Eukaryotic ribosomal protein L30 (L30e) |Thermococcus celer [TaxId: 2264]
 d1w42a1 :     (ASP2)   (ASP87)   [view usage] : d.79.3.1 |Bacillus chorismate mutase-like |L30e-like |L30e/L7ae ribosomal proteins |Eukaryotic ribosomal protein L30 (L30e) |Thermococcus celer [TaxId: 2264]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   i.1,    d.79