Protein Concepts Dictionary

Tableau information

Concept source:  d4hwob2  amino acid (a.a.) range (SER552)(ARG635)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HEHEHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER552)  (GLY566) H1
	  (ARG568)  (LEU573) E2
	  (LYS577)  (ARG589) H3
	  (PRO591)  (GLY597) E4
	  (GLY597)  (SER603) H5
	  (GLY604)  (THR610) E6
	  (GLY613)  (GLY617) E7
	  (ASP620)  (ARG635) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
E2     -172.6°   E2                                               
H3      -20.0°  156.9°   H3                                        
E4      148.7°  -33.6°  168.6°   E4                                 
H5       60.5° -121.3°   80.4°  -88.3°   H5                          
E6      -71.1°  108.2°  -51.5°  139.9°  130.4°   E6                   
E7      103.0°  -80.4°  122.5°  -47.0°   44.0°  157.5°   E7            
H8      -33.4°  142.4°   14.7° -170.5°  -93.1°   42.0°  136.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1h4qa1 :   (LYS297)  (HIS403)   [view usage] : c.51.1.1 |Anticodon-binding domain-like |Class II aaRS ABD-related |Anticodon-binding domain of Class II aaRS |Prolyl-tRNA synthetase (ProRS) domain |Thermus thermophilus [TaxId: 274]
 d1evka1 :   (SER552)  (ARG635)   [view usage] : c.51.1.1 |Anticodon-binding domain-like |Class II aaRS ABD-related |Anticodon-binding domain of Class II aaRS |Threonyl-tRNA synthetase (ThrRS), C-terminal domain |Escherichia coli [TaxId: 562]
 d4hwra2 :   (SER552)  (ARG635)   [view usage] : c.51.1.0 |Anticodon-binding domain-like |Class II aaRS ABD-related |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d4hwoa2 :   (SER552)  (ARG635)   [view usage] : c.51.1.0 |Anticodon-binding domain-like |Class II aaRS ABD-related |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d4hwta2 :   (ASP664)  (ARG748)   [view usage] : c.51.1.0 |Anticodon-binding domain-like |Class II aaRS ABD-related |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4hwob2 :   (SER552)  (ARG635)   [view usage] : c.51.1.0 |Anticodon-binding domain-like |Class II aaRS ABD-related |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.51