Protein Concepts Dictionary

Tableau information

Concept source:  d1b3ba1  amino acid (a.a.) range (ALA187)(LEU284)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HEHEEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ALA187)  (GLY204) H1
	  (ALA210)  (GLY216) E2
	  (GLY218)  (GLY233) H3
	  (VAL237)  (SER242) E4
	  (ARG243)  (PRO249) E5
	  (ASP253)  (GLU263) H6
	  (LYS272)  (THR277) E7
	  (THR277)  (LEU284) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
E2      143.8°   E2                                               
H3      -49.6° -166.4°   H3                                        
E4      139.6°   -5.7° -170.6°   E4                                 
E5      -41.8°  170.3°   10.0°  175.6°   E5                          
H6      144.1°  -12.6° -158.3°  -17.5°  158.1°   H6                   
E7       91.5°  -55.4°  137.6°  -50.0°  132.6°  -63.5°   E7            
H8      -41.1° -153.5°   33.2° -148.9°   35.5° -166.1°  107.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1b3ba1 :   (ALA187)  (LEU284)   [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Glutamate dehydrogenase |Thermotoga maritima [TaxId: 2336]
 d1euza1 :   (ALA190)  (GLU286)   [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Glutamate dehydrogenase |Thermococcus profundus [TaxId: 49899]
 d2tmga1 :   (ALA187)  (GLU283)   [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Glutamate dehydrogenase |Thermotoga maritima [TaxId: 2336]
 d1gtma1 :   (ALA189)  (LEU287)   [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Glutamate dehydrogenase |Pyrococcus furiosus [TaxId: 2261]
 d1b26a1 :   (ALA187)  (LEU284)   [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Glutamate dehydrogenase |Thermotoga maritima [TaxId: 2336]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.2