Protein Concepts Dictionary

Tableau information

Concept source:  d1b3sa_  amino acid (a.a.) range (ASP8)(LYS108)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HEHEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ASP8)   (HIS18) H1
	   (ASN23)   (THR26) E2
	   (THR26)   (GLY34) H3
	   (GLY48)   (ASP54) E4
	   (THR70)   (ASP75) E5
	   (ASP86)   (SER91) E6
	   (LEU95)  (THR100) E7
	  (GLN104)  (LYS108) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
E2      -79.4°   E2                                               
H3      109.3° -110.7°   H3                                        
E4      -57.0°  -30.4° -134.3°   E4                                 
E5      142.7°  131.5°   46.3°  159.6°   E5                          
E6      -19.7°  -68.0°  127.7°  -40.8°  159.6°   E6                   
E7      160.2°   95.5°  -54.4°  123.8°  -36.2°  163.3°   E7            
E8      -55.3° -119.4°  120.4°  -88.9°  107.7°  -55.9°  140.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1b2uc_ :     (THR6)  (LYS108)   [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |Barnase |Bacillus amyloliquefaciens [TaxId: 1390]
 d1b3sa_ :     (ASP8)  (LYS108)   [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |Barnase |Bacillus amyloliquefaciens [TaxId: 1390]
 d1bsba_ :     (ASP8)  (LYS108)   [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |Barnase |Bacillus amyloliquefaciens [TaxId: 1390]
 d1b3sc_ :     (ASP8)  (LYS108)   [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |Barnase |Bacillus amyloliquefaciens [TaxId: 1390]
 d1brha_ :     (THR6)  (LYS108)   [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |Barnase |Bacillus amyloliquefaciens [TaxId: 1390]
 d1b20b_ :     (THR6)  (LYS108)   [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |Barnase |Bacillus amyloliquefaciens [TaxId: 1390]
 d1bnsc_ :     (THR6)  (LYS108)   [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |Barnase |Bacillus amyloliquefaciens [TaxId: 1390]
 d1bsaa_ :     (THR6)  (LYS108)   [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |Barnase |Bacillus amyloliquefaciens [TaxId: 1390]
 d1b2zc_ :     (ASP8)  (LYS108)   [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |Barnase |Bacillus amyloliquefaciens [TaxId: 1390]
 d1bnjc_ :     (THR6)  (LYS108)   [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |Barnase |Bacillus amyloliquefaciens [TaxId: 1390]
 d1baoa_ :     (THR6)  (LYS108)   [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |Barnase |Bacillus amyloliquefaciens [TaxId: 1390]
 d1gova_ :     (THR5)  (ARG107)   [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |Binase |Bacillus intermedius [TaxId: 1400]
 d1bria_ :     (ASP8)  (LYS108)   [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |Barnase |Bacillus amyloliquefaciens [TaxId: 1390]
 d1brkc_ :     (ASP8)  (LYS108)   [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |Barnase |Bacillus amyloliquefaciens [TaxId: 1390]
 d1bnfb_ :     (ASP8)  (LYS108)   [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |Barnase |Bacillus amyloliquefaciens [TaxId: 1390]
 d1brka_ :     (ASP8)  (LYS108)   [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |Barnase |Bacillus amyloliquefaciens [TaxId: 1390]
 d1banc_ :     (THR6)  (LYS108)   [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |Barnase |Bacillus amyloliquefaciens [TaxId: 1390]
 d1bsca_ :     (THR6)  (LYS108)   [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |Barnase |Bacillus amyloliquefaciens [TaxId: 1390]
 d1bric_ :     (ASP8)  (LYS108)   [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |Barnase |Bacillus amyloliquefaciens [TaxId: 1390]
 d4haaa_ :     (ASP7)  (ARG107)   [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |automated matches |Bacillus intermedius [TaxId: 1400]
 d1bsda_ :     (THR6)  (LYS108)   [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |Barnase |Bacillus amyloliquefaciens [TaxId: 1390]
 d1bnfa_ :     (ASP8)  (LYS108)   [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |Barnase |Bacillus amyloliquefaciens [TaxId: 1390]
 d2za4c_ :     (THR6)  (LYS108)   [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |Barnase |Bacillus amyloliquefaciens [TaxId: 1390]
 d1b20a_ :     (THR6)  (LYS108)   [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |Barnase |Bacillus amyloliquefaciens [TaxId: 1390]
 d1x1yb_ :     (ASP8)  (ARG110)   [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |Barnase |Bacillus amyloliquefaciens [TaxId: 1390]
 d1bngb_ :     (ASP8)  (LYS108)   [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |Barnase |Bacillus amyloliquefaciens [TaxId: 1390]
 d1baoc_ :     (ASP8)  (LYS108)   [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |Barnase |Bacillus amyloliquefaciens [TaxId: 1390]
 d1brja_ :     (ASP8)  (LYS108)   [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |Barnase |Bacillus amyloliquefaciens [TaxId: 1390]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   d.1