Protein Concepts Dictionary

Tableau information

Concept source:  d1wkfa_  amino acid (a.a.) range (CYS281)(PHE382)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HEEHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (CYS281)  (GLY291) H1
	  (GLY291)  (THR295) E2
	  (GLY298)  (ARG303) E3
	  (ASN304)  (ASP310) H4
	  (CYS320)  (LYS325) H5
	  (ARG328)  (GLY338) H6
	  (ILE340)  (GLY368) H7
	  (PHE370)  (PHE382) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
E2     -121.5°   E2                                               
E3       36.3°  153.9°   E3                                        
H4      -74.6°   73.3°  -84.6°   H4                                 
H5       24.0°  -97.6°   59.0°  -62.0°   H5                          
H6      -85.1°  151.4°  -54.7° -128.6°  108.9°   H6                   
H7      142.9°   23.1°  175.8°   91.3° -119.5° -128.3°   H7            
H8       27.7°  134.6°   37.0°  102.1°   46.8°  -65.2°  145.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1q2ra_ :   (CYS281)  (ARG384)   [view usage] : c.1.20.1 |TIM beta/alpha-barrel |tRNA-guanine transglycosylase |tRNA-guanine transglycosylase |Queosine tRNA-guanine transglycosylase |Zymomonas mobilis [TaxId: 542]
 d3uvia_ :   (LEU283)  (ALA383)   [view usage] : c.1.20.1 |TIM beta/alpha-barrel |tRNA-guanine transglycosylase |tRNA-guanine transglycosylase |Queosine tRNA-guanine transglycosylase |Zymomonas mobilis [TaxId: 542]
 d1ozma_ :   (CYS281)  (PHE382)   [view usage] : c.1.20.1 |TIM beta/alpha-barrel |tRNA-guanine transglycosylase |tRNA-guanine transglycosylase |Queosine tRNA-guanine transglycosylase |Zymomonas mobilis [TaxId: 542]
 d1wkfa_ :   (CYS281)  (PHE382)   [view usage] : c.1.20.1 |TIM beta/alpha-barrel |tRNA-guanine transglycosylase |tRNA-guanine transglycosylase |Queosine tRNA-guanine transglycosylase |Zymomonas mobilis [TaxId: 542]
 d1wkea_ :   (CYS281)  (PHE382)   [view usage] : c.1.20.1 |TIM beta/alpha-barrel |tRNA-guanine transglycosylase |tRNA-guanine transglycosylase |Queosine tRNA-guanine transglycosylase |Zymomonas mobilis [TaxId: 542]
 d4ippa_ :   (LEU283)  (ALA383)   [view usage] : c.1.20.1 |TIM beta/alpha-barrel |tRNA-guanine transglycosylase |tRNA-guanine transglycosylase |Queosine tRNA-guanine transglycosylase |Zymomonas mobilis [TaxId: 264203]
 d1wkda_ :   (CYS281)  (PHE382)   [view usage] : c.1.20.1 |TIM beta/alpha-barrel |tRNA-guanine transglycosylase |tRNA-guanine transglycosylase |Queosine tRNA-guanine transglycosylase |Zymomonas mobilis [TaxId: 542]
 d1efza_ :   (CYS281)  (PHE382)   [view usage] : c.1.20.1 |TIM beta/alpha-barrel |tRNA-guanine transglycosylase |tRNA-guanine transglycosylase |Queosine tRNA-guanine transglycosylase |Zymomonas mobilis [TaxId: 542]
 d4hqva_ :   (CYS281)  (ALA383)   [view usage] : c.1.20.1 |TIM beta/alpha-barrel |tRNA-guanine transglycosylase |tRNA-guanine transglycosylase |Queosine tRNA-guanine transglycosylase |Zymomonas mobilis [TaxId: 264203]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1