Protein Concepts Dictionary

Tableau information

Concept source:  d3mxbr_  amino acid (a.a.) range (ARG52)(LEU155)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HEEHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ARG52)   (GLY63) H1
	   (TYR66)   (GLY71) E2
	   (SER72)   (GLU80) E3
	   (ILE81)   (LEU95) H4
	   (GLN99)  (GLN111) H5
	  (LEU112)  (SER118) H6
	  (SER118)  (ASN136) H7
	  (THR144)  (LEU155) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
E2      167.1°   E2                                               
E3       15.1°  152.2°   E3                                        
H4      105.4°  -79.9° -107.0°   H4                                 
H5      -45.0°  126.0°  -40.6° -147.3°   H5                          
H6      -90.4°   76.8°  -76.7°  121.4°   57.8°   H6                   
H7      139.3°  -52.3°  148.7°   45.8° -165.0° -127.6°   H7            
H8      -63.2°  105.2°  -52.6° -141.4°   25.9°  -31.9°  157.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1bp7a_ :    (ARG52)  (ASP153)   [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |DNA endonuclease I-CreI |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
 d1u0ca_ :    (ARG52)  (ALA150)   [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |DNA endonuclease I-CreI |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
 d2i3qa_ :    (ARG52)  (ALA150)   [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |automated matches |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
 d2i3pa_ :    (ARG52)  (ASP153)   [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |automated matches |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
 d3mxba_ :    (ARG52)  (VAL151)   [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |automated matches |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
 d2vbnb_ :    (ARG52)  (ASP153)   [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |automated matches |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
 d2xe0a_ :    (ARG52)  (ASP153)   [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |automated matches |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
 d1t9ib_ :   (ARG352)  (SER456)   [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |DNA endonuclease I-CreI |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
 d1t9ja_ :    (LYS48)  (ASP153)   [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |DNA endonuclease I-CreI |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
 d1m5xa_ :    (PRO56)  (GLY164)   [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |DNA endonuclease I-MsoI |Monomastix sp. cl-1997 [TaxId: 141716]
 d3fd2a2 :   (PHE258)  (GLY367)   [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |automated matches |Monomastix sp. [TaxId: 141716]
 d1u0da_ :    (ARG52)  (ASP153)   [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |DNA endonuclease I-CreI |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
 d2vbjb_ :    (ARG52)  (LEU152)   [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |automated matches |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
 d1t9ia_ :    (ARG52)  (SER154)   [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |DNA endonuclease I-CreI |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
 d2o7ma_ :    (ARG52)  (SER154)   [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |automated matches |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
 d1n3fa_ :    (ARG52)  (ALA150)   [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |DNA endonuclease I-CreI |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
 d3mxbs_ :    (ARG52)  (ASP153)   [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |automated matches |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
 d1mowa1 :   (ARG149)  (LEU252)   [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |DNA endonuclease I-CreI |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
 d3fd2a1 :    (PHE55)  (GLY164)   [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |automated matches |Monomastix sp. [TaxId: 141716]
 d2vbja_ :    (ARG52)  (LEU152)   [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |automated matches |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
 d2vbla_ :    (ARG52)  (ASP153)   [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |automated matches |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
 d2xe0b_ :    (ARG52)  (ASP153)   [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |automated matches |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
 d3mxbr_ :    (ARG52)  (LEU155)   [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |automated matches |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
 d3mxbb_ :    (ARG52)  (ASP153)   [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |automated matches |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
 d2vblb_ :    (ARG52)  (VAL151)   [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |automated matches |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
 d1n3ea_ :    (ARG52)  (ALA150)   [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |DNA endonuclease I-CreI |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.95