Protein Concepts Dictionary

Tableau information

Concept source:  d1wwra1  amino acid (a.a.) range (GLY2)(SER100)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HEEHHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (GLY2)   (GLY21) H1
	   (PRO24)   (ILE29) E2
	   (SER37)   (ASN41) E3
	   (SER42)   (LYS47) H4
	   (GLU54)   (ASN66) H5
	   (GLY72)   (THR78) E6
	   (CYS82)   (ARG93) H7
	   (GLU95)  (SER100) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
E2      136.9°   E2                                               
E3      -44.2°  158.0°   E3                                        
H4       38.7°  -99.2°  -74.5°   H4                                 
H5      114.7°  -27.1°  156.6°   82.2°   H5                          
E6      -51.1°  168.0°  -33.1°  -89.7°  149.7°   E6                   
H7      130.8°   -7.3°  160.3°   94.1°   19.8°  166.1°   H7            
E8      -66.4°  150.8°  -48.7° -104.8°  142.1°  -17.4°  151.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1wwra1 :     (GLY2)  (SER100)   [view usage] : c.97.1.2 |Cytidine deaminase-like |Cytidine deaminase-like |Deoxycytidylate deaminase-like |tRNA adenosine deaminase TadA |Aquifex aeolicus [TaxId: 63363]
 d1wkqa_ :     (HIS3)  (ALA102)   [view usage] : c.97.1.2 |Cytidine deaminase-like |Cytidine deaminase-like |Deoxycytidylate deaminase-like |Guanine deaminase GuaD |Bacillus subtilis [TaxId: 1423]
 d1z3aa1 :    (SER18)  (ALA117)   [view usage] : c.97.1.2 |Cytidine deaminase-like |Cytidine deaminase-like |Deoxycytidylate deaminase-like |tRNA adenosine deaminase TadA |Escherichia coli [TaxId: 562]
 d1wkqb_ :     (ASN2)  (ALA101)   [view usage] : c.97.1.2 |Cytidine deaminase-like |Cytidine deaminase-like |Deoxycytidylate deaminase-like |Guanine deaminase GuaD |Bacillus subtilis [TaxId: 1423]
 d2nx8a_ :    (SER12)  (GLY113)   [view usage] : c.97.1.0 |Cytidine deaminase-like |Cytidine deaminase-like |automated matches |automated matches |Streptococcus pyogenes [TaxId: 301450]
 d3ocqa_ :    (HIS19)  (GLY116)   [view usage] : c.97.1.2 |Cytidine deaminase-like |Cytidine deaminase-like |Deoxycytidylate deaminase-like |automated matches |Salmonella enterica [TaxId: 28901]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.97