Protein Concepts Dictionary

Tableau information

Concept source:  d3e5xd2  amino acid (a.a.) range (ASN148)(GLN228)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HEEHHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASN148)  (SER163) H1
	  (GLN164)  (GLY169) E2
	  (THR171)  (THR175) E3
	  (SER179)  (GLY188) H4
	  (HIS191)  (ASN205) H5
	  (ILE206)  (LYS211) E6
	  (ASN212)  (ASN218) E7
	  (LEU219)  (GLN228) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
E2      -75.9°   E2                                               
E3       88.5°  141.3°   E3                                        
H4      110.8° -129.8°   88.7°   H4                                 
H5      -58.0°  -25.0° -143.0°  116.1°   H5                          
E6       81.2°  120.4°  -20.9°  109.7° -126.5°   E6                   
E7      -97.1°  -59.3°  159.2°  -70.5°   52.5°  178.3°   E7            
H8     -145.8°  132.2°  -78.2°  -38.7°  138.3°  -95.0°   86.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2h6ca1 :   (ASN148)  (HIS224)   [view usage] : a.4.5.4 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |CAP C-terminal domain-like |Chlorophenol reduction protein CprK |Desulfitobacterium dehalogenans [TaxId: 36854]
 d2h6bb1 :   (ASN148)  (SER226)   [view usage] : a.4.5.4 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |CAP C-terminal domain-like |Chlorophenol reduction protein CprK |Desulfitobacterium hafniense [TaxId: 49338]
 d3e5ud1 :   (PRO149)  (GLN228)   [view usage] : a.4.5.4 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |CAP C-terminal domain-like |Chlorophenol reduction protein CprK |Desulfitobacterium hafniense [TaxId: 49338]
 d3e5ub1 :   (ASN148)  (SER226)   [view usage] : a.4.5.4 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |CAP C-terminal domain-like |Chlorophenol reduction protein CprK |Desulfitobacterium hafniense [TaxId: 49338]
 d3e6db2 :   (ILE151)  (GLN228)   [view usage] : a.4.5.4 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |CAP C-terminal domain-like |Chlorophenol reduction protein CprK |Desulfitobacterium hafniense [TaxId: 49338]
 d3e6cc1 :   (ASN148)  (GLU227)   [view usage] : a.4.5.4 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |CAP C-terminal domain-like |Chlorophenol reduction protein CprK |Desulfitobacterium hafniense [TaxId: 49338]
 d3e6da2 :   (ILE151)  (LEU225)   [view usage] : a.4.5.4 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |CAP C-terminal domain-like |Chlorophenol reduction protein CprK |Desulfitobacterium hafniense [TaxId: 49338]
 d3e5uc1 :   (ASN148)  (GLU227)   [view usage] : a.4.5.4 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |CAP C-terminal domain-like |Chlorophenol reduction protein CprK |Desulfitobacterium hafniense [TaxId: 49338]
 d3e5xd2 :   (ASN148)  (GLN228)   [view usage] : a.4.5.4 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |CAP C-terminal domain-like |Chlorophenol reduction protein CprK |Desulfitobacterium hafniense [TaxId: 49338]
 d3e5xb2 :   (ASN148)  (GLU227)   [view usage] : a.4.5.4 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |CAP C-terminal domain-like |Chlorophenol reduction protein CprK |Desulfitobacterium hafniense [TaxId: 49338]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   a.4