Protein Concepts Dictionary

Tableau information

Concept source:  d2ejka_  amino acid (a.a.) range (ALA178)(VAL263)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HEEHEEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ALA178)  (LYS193) H1
	  (VAL203)  (ARG208) E2
	  (PRO214)  (GLY219) E3
	  (VAL221)  (GLU227) H4
	  (PRO233)  (VAL238) E5
	  (GLY240)  (ILE244) E6
	  (ILE244)  (GLY255) H7
	  (PRO257)  (VAL263) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
E2      151.8°   E2                                               
E3      -31.2°  169.7°   E3                                        
H4     -140.2°   25.4°  144.6°   H4                                 
E5      -35.0°  160.7°  -29.4° -173.8°   E5                          
E6     -116.3°   88.7°  -94.4°  102.8°  -81.4°   E6                   
H7     -132.7°   54.8° -115.3°   35.9° -140.8°  -89.3°   H7            
H8       60.4° -113.2°   76.9° -134.7°   49.7°  -84.6° -166.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1wnga_ :   (ALA178)  (VAL263)   [view usage] : c.90.1.0 |Tetrapyrrole methylase |Tetrapyrrole methylase |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 53953]
 d2ejka_ :   (ALA178)  (VAL263)   [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]
 d2egla_ :   (ALA178)  (VAL263)   [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]
 d2egba_ :   (ALA178)  (VAL263)   [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]
 d2dxxa_ :   (ALA178)  (VAL263)   [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.90