Protein Concepts Dictionary

Tableau information

Concept source:  d1s20g_  amino acid (a.a.) range (GLY121)(ASN253)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HEEEHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLY121)  (GLY131) H1
	  (ILE133)  (ASN139) E2
	  (ARG153)  (PRO164) E3
	  (THR169)  (SER174) E4
	  (TYR180)  (GLY190) H5
	  (PRO209)  (ASN215) H6
	  (GLY222)  (ASP242) H7
	  (SER245)  (ASN253) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
E2      167.9°   E2                                               
E3      -15.7°  169.1°   E3                                        
E4      165.2°   -5.8° -174.3°   E4                                 
H5     -114.8°   76.4°  100.1°  -80.0°   H5                          
H6      108.4°  -59.6° -120.3°   57.5° -133.8°   H6                   
H7       76.4°  -92.2°   83.5°  -92.6° -137.9°  -41.1°   H7            
H8      136.2°  -41.9°  127.2°  -47.5°  -67.5°  -70.2°   77.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1s20f_ :   (GLY121)  (ASN253)   [view usage] : c.122.1.1 |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |2,3-diketogulonate oxidoreductase (YiaK) |Escherichia coli [TaxId: 562]
 d1s20a_ :   (GLY121)  (GLN251)   [view usage] : c.122.1.1 |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |2,3-diketogulonate oxidoreductase (YiaK) |Escherichia coli [TaxId: 562]
 d1s20g_ :   (GLY121)  (ASN253)   [view usage] : c.122.1.1 |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |2,3-diketogulonate oxidoreductase (YiaK) |Escherichia coli [TaxId: 562]
 d1nxub_ :   (GLY121)  (ASN253)   [view usage] : c.122.1.1 |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |2,3-diketogulonate oxidoreductase (YiaK) |Escherichia coli [TaxId: 562]
 d1nxua_ :   (GLY121)  (ASN253)   [view usage] : c.122.1.1 |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |2,3-diketogulonate oxidoreductase (YiaK) |Escherichia coli [TaxId: 562]
 d1wtja_ :   (LEU130)  (ASP262)   [view usage] : c.122.1.0 |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |automated matches |automated matches |Pseudomonas syringae [TaxId: 323]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 c.122