Protein Concepts Dictionary

Tableau information

Concept source:  d1y9kd_  amino acid (a.a.) range (SER24)(GLY115)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HEEEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (SER24)   (GLY35) H1
	   (GLY35)   (LYS41) E2
	   (GLY48)   (GLU54) E3
	   (LYS58)   (ALA68) E4
	   (ILE76)   (GLY92) H5
	   (LYS95)  (GLY101) E6
	  (GLY101)  (SER104) H7
	  (SER104)  (GLY115) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
E2      -98.9°   E2                                               
E3       63.1°  159.7°   E3                                        
E4     -130.3°  -36.7°  163.6°   E4                                 
H5       40.7°  138.9°  -27.0°  156.6°   H5                          
E6     -173.4°  -74.7°  123.4°  -43.2°  145.3°   E6                   
H7      -60.5°   60.3° -100.6°   95.1°  -93.9°  116.2°   H7            
H8       16.3°   94.9°  -65.1°  130.7°  -48.9° -162.5°  -46.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1y9kb_ :    (SER24)  (GLY115)   [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |automated matches |Bacillus cereus [TaxId: 226900]
 d1ygha_ :   (PRO132)  (GLY225)   [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Catalytic domain of GCN5 histone acetyltransferase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1qsmd_ :    (ASP40)  (VAL142)   [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Histone acetyltransferase HPA2 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d4evyb_ :    (SER25)  (GLY130)   [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Acinetobacter haemolyticus [TaxId: 29430]
 d1y9kc_ :    (SER24)  (GLY115)   [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |automated matches |Bacillus cereus [TaxId: 226900]
 d1i21y_ :    (PRO35)  (GLY147)   [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Glucosamine-phosphate N-acetyltransferase GNA1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1y9kd_ :    (SER24)  (GLY115)   [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |automated matches |Bacillus cereus [TaxId: 226900]
 d1y9ka1 :    (SER24)  (GLY115)   [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |IAA acetyltransferase |Bacillus cereus [TaxId: 1396]
 d1qsta_ :    (PRO81)  (GLY173)   [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Catalytic domain of GCN5 histone acetyltransferase |Tetrahymena thermophila [TaxId: 5911]
 d1iyka2 :   (THR296)  (LYS407)   [view usage] : d.108.1.2 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-myristoyl transferase, NMT |N-myristoyl transferase, NMT |Yeast (Candida albicans) [TaxId: 5476]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.108